DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btsz and sytl3

DIOPT Version :9

Sequence 1:NP_001247109.1 Gene:btsz / 3346167 FlyBaseID:FBgn0266756 Length:3734 Species:Drosophila melanogaster
Sequence 2:XP_002937258.2 Gene:sytl3 / 100379855 XenbaseID:XB-GENE-5884483 Length:443 Species:Xenopus tropicalis


Alignment Length:493 Identity:120/493 - (24%)
Similarity:201/493 - (40%) Gaps:98/493 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  3078 LSQLSQLDRD----------NSSSASALAVAKRRSAGDLLFSQHQQSLSRE-----------QLD 3121
            ||.|.:|:|:          :...|....:.|.::....|..:..:|:|||           .|.
 Frog     7 LSFLKELEREKVLEVLYRDQSLQKAEEERIRKLKTHLQQLRWKGAKSVSREYDERSCARCQKALG 71

  Fly  3122 RVRSCGSIGGGDAHHHQLESSP---AKPWLSSAGSSIG------GDSTKDVRRSSVPDAIYETDS 3177
            |:.:.||:..|.:|....|...   ...|..:..::.|      |:...:.|....|        
 Frog    72 RLLNRGSVCNGCSHRVCRECQVFLCNLIWKCTVCNAHGEVKIKTGEWFFEEREKKFP-------- 128

  Fly  3178 SDEAASHQFGGARSTLPRSLNPNQVVASTNSLPRLPTTGVGAPITSTPKTKSQSALNHTPSNLST 3242
              .|.:|:..||:  |.:|......::.....|  |......|..::.:...:...|.:..|| .
 Frog   129 --SAGNHESVGAK--LLKSYQKTSKISVVPPTP--PPFSDVTPWNTSMELSKEKGFNKSVENL-I 186

  Fly  3243 VSATGSAKSARYRSPGLAARAAAVSGAGGGSSGGVGVGASSGSTGKKLGAGFQFLY---SKRDAR 3304
            :|.|...|.                             .|......::...|....   .|.:.|
 Frog   187 LSLTSQVKK-----------------------------ISKSQNDMRITDKFHLTTDYGQKAERR 222

  Fly  3305 KRLNMSAEEAKVAAEELSRSPVIGQRQADGSGSPIQSRASSETWPTQSD---EDIDRLVAMHQNR 3366
            |....:::.|...|.||.::..:.|.        |..|...::|..:.:   |..|....|   :
 Frog   223 KDRRSNSDTAINLASELEKAHSLHQF--------IHKRKEKKSWKEKKEVKQETEDETSTM---K 276

  Fly  3367 SSLSSLGVRSESMASVYSGAGE-GRYGTVVVKGQVEFAMQYNYKLSALEVHVVRCKDLAAVDAKR 3430
            |.......:..|:.|:.|...| |.|....:.|::|||::||:|...||:.:..||:||..|.|:
 Frog   277 SKTLCGSTKRVSVCSITSTCTEAGSYDNANITGEIEFAVKYNFKTCTLEITIKACKNLAYGDEKK 341

  Fly  3431 NRSDPYVKVYLLPDKSKAGKRKTKVKKHTLNPIFDETMRFHTPISSLESRTLWLTVWHSDMFGRN 3495
            .:.:||||.||||:||.: |.||.:||:|::|.|:||:::....|.||:|.|.:::||.....|.
 Frog   342 KKCNPYVKTYLLPEKSHS-KMKTSIKKNTVDPCFNETLKYTIEHSQLETRILQVSLWHVSTLKRK 405

  Fly  3496 DFLGEVSVNLQGRLFDNPQSQ---WYLLQERSEPFDEV 3530
            .||||||:.|:...|::..:|   ||  |.||:.:..|
 Frog   406 VFLGEVSLPLEFWDFEDNSTQSFKWY--QLRSKEYHRV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btszNP_001247109.1 FYVE_Slp3_4_5 26..73 CDD:277286
SOBP <300..476 CDD:291927
C2A_SLP 3398..3520 CDD:176056 54/124 (44%)
C2B_SLP_1-2-3-4 3534..3723 CDD:175987
sytl3XP_002937258.2 FYVE_Slp3 60..107 CDD:277304 8/46 (17%)
C2A_SLP 309..433 CDD:176056 54/126 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 62 1.000 Domainoid score I10126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.