Sequence 1: | NP_001247206.1 | Gene: | Gfrl / 3346162 | FlyBaseID: | FBgn0262869 | Length: | 1279 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001486.4 | Gene: | GFRA2 / 2675 | HGNCID: | 4244 | Length: | 464 | Species: | Homo sapiens |
Alignment Length: | 335 | Identity: | 77/335 - (22%) |
---|---|---|---|
Similarity: | 112/335 - (33%) | Gaps: | 94/335 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 KILSCCLSLWVVLFGGALHLAQGSEFPERECCDLTTTSTVGPLPMPPAALPTDKSLSSATTALET 74
Fly 75 D---LAIGRSGSTIKGVVAIL--NCILARQLCFEDPSC----SAILEIIPRVCGPIPVSCSTVTV 130
Fly 131 TKCQAALRTLQAFQFFR--PT--------CLCKEPGMDPDCNHFRDFLFDHPCGFVLKKAEKDPY 185
Fly 186 PIDALPTCNHALSVCQQERKCLKLFEDFKTHCKV---RDNKCKMENRDACHDSW----------- 236
Fly 237 ------TNLRLSPMFGCICPNNHMKKRCDRIFNIVNHNPCVDRLI-FFPNGLPKLKQPR-PKAKP 293
Fly 294 RPKPKPKSKP 303 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gfrl | NP_001247206.1 | GDNF | 94..173 | CDD:280506 | 23/92 (25%) |
GDNF | 193..270 | CDD:197975 | 20/96 (21%) | ||
GDNF | 641..727 | CDD:197975 | |||
GDNF | 751..832 | CDD:280506 | |||
GFRA2 | NP_001486.4 | GDNF | 40..113 | CDD:197975 | 4/11 (36%) |
GDNF | 161..241 | CDD:308135 | 23/92 (25%) | ||
GDNF | 251..347 | CDD:308135 | 20/96 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 363..392 | 4/20 (20%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165150021 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10269 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |