DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr4 and sdk1a

DIOPT Version :9

Sequence 1:NP_001014616.2 Gene:dpr4 / 3346160 FlyBaseID:FBgn0053512 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_009297968.1 Gene:sdk1a / 558391 ZFINID:ZDB-GENE-081104-374 Length:2245 Species:Danio rerio


Alignment Length:251 Identity:69/251 - (27%)
Similarity:102/251 - (40%) Gaps:32/251 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GEVPPH-YWETPYSQPYFDNSSRREVTATVGQAALLHCRVRNLGDRAVSWIRKRDLHILTVGILT 94
            ||...| |.:.....|.| .:...::|.|.|..|...|||......|:.|  :||..||..|.:.
Zfish   495 GEAQVHTYLDVTSMAPAF-TAPPLDITVTDGAVAAFTCRVSGAPKPAIVW--RRDTQILASGSVQ 556

  Fly    95 YTNDQRFQSLHSEGSDEWTLRISSPQPRDSGTYEC-QVSTEPKISQGFRLNVVVSRAKILG-NAE 157
            .   .||..|.|.|     |:|.....:|:|.|.| ..::|..|:....| .|.||..|.. ..:
Zfish   557 I---PRFTLLESGG-----LQIQPVVLQDTGNYTCYAANSEGAINASASL-TVWSRTSISSPPTD 612

  Fly   158 LFIKSGSDINLTCLAMQSPVPPSFIYWYKGKRVMNYSQRGGINVITERSTRTSKLLIAKATPADS 222
            ..:..|:...|.|.|...|.......|.|.:.::::|:.|.|      |.:...|.|::....|.
Zfish   613 RRVIKGTTAILECGATHDPRVGVRYVWKKDEELVSHSRGGRI------SLQEGSLHISQTWSGDI 671

  Fly   223 GNYTC---SPSSSDSASVVVHVINGEH-PAAMQ---HGNSSATC----LRPLSSTS 267
            |||||   |.:.::|....:.||...| |..:|   :.|.|.:.    :||....|
Zfish   672 GNYTCDVISEAGNESKEARLEVIELPHSPRNLQASLNANDSRSVDLSWMRPFDGNS 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr4NP_001014616.2 V-set 53..146 CDD:284989 28/93 (30%)
IG_like 53..145 CDD:214653 28/92 (30%)
ig 153..227 CDD:278476 17/74 (23%)
IG_like 161..>227 CDD:214653 17/65 (26%)
sdk1aXP_009297968.1 I-set 125..208 CDD:254352
Ig 125..204 CDD:299845
IG_like 222..302 CDD:214653
Ig 236..287 CDD:299845
Ig_3 322..394 CDD:290638
I-set 323..412 CDD:254352
I-set 416..505 CDD:254352 4/9 (44%)
Ig 436..500 CDD:299845 2/4 (50%)
I-set 510..600 CDD:254352 30/101 (30%)
Ig 527..600 CDD:299845 25/83 (30%)
I-set 605..693 CDD:254352 22/93 (24%)
Ig 610..693 CDD:299845 21/88 (24%)
FN3 697..788 CDD:238020 8/31 (26%)
fn3 800..886 CDD:278470
FN3 901..997 CDD:238020
FN3 1002..1090 CDD:238020
FN3 1100..1196 CDD:238020
FN3 1206..1301 CDD:238020
FN3 1308..1397 CDD:238020
FN3 1408..1501 CDD:238020
FN3 1507..1602 CDD:238020
FN3 1616..1722 CDD:238020
FN3 1732..1825 CDD:238020
FN3 1830..1919 CDD:238020
FN3 1931..2021 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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