DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr4 and LRIT1

DIOPT Version :9

Sequence 1:NP_001014616.2 Gene:dpr4 / 3346160 FlyBaseID:FBgn0053512 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_056428.1 Gene:LRIT1 / 26103 HGNCID:23404 Length:623 Species:Homo sapiens


Alignment Length:310 Identity:57/310 - (18%)
Similarity:102/310 - (32%) Gaps:65/310 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WTTDCPRALKAICLVPLWL--LLFLD-----------CGMVGGEVPPHYWETPYSQPYFDNSSRR 53
            |..|| |....:.|:..|.  |.|::           .|:...::.....:.|...|     ...
Human   203 WACDC-RLYDLVHLLDGWAPNLAFIETELRCASPRSLAGVAFSQLELRKCQGPELHP-----GVA 261

  Fly    54 EVTATVGQAALLHCRVRNLGDRAVSWIRKRDLHILTVGILTYTNDQRFQSLHSEGSDEWT-LRIS 117
            .:.:.:|..|||.|....:....:||.|.....:         |....|.:.|:|: .|| |.:.
Human   262 SIRSLLGGTALLRCGATGVPGPEMSWRRANGRPL---------NGTVHQEVSSDGT-SWTLLGLP 316

  Fly   118 SPQPRDSGTYECQ--------------VSTEPKISQGFRLNVVVSRAKILG-------NAELFIK 161
            :....|||.|.||              :.|||..|.....:.....|:..|       |.:|..:
Human   317 AVSHLDSGDYICQAKNFLGASETVISLIVTEPPTSTEHSGSPGALWARTGGGGEAAAYNNKLVAR 381

  Fly   162 SGSDINLTCLAMQSPVPPSFIYWYKGKRVMNYSQRGGINVITERSTRTSKLLIAKATPADSGNY- 225
            ....|....:....|..||    .|.:..:.:.|...:..:::.....|:..:.::.......| 
Human   382 HVPQIPKPAVLATGPSVPS----TKEELTLEHFQMDALGELSDGRAGPSEARMVRSVKVVGDTYH 442

  Fly   226 ------TCSPSSSDSASVVVHVINGEHP---AAMQHGNSSATCLRPLSST 266
                  ....:.:.:|..|::.:.|:|.   ..:|.|.:..|....|..|
Human   443 SVSLVWKAPQAKNTTAFSVLYAVFGQHSMRRVIVQPGKTRVTITGLLPKT 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr4NP_001014616.2 V-set 53..146 CDD:284989 25/107 (23%)
IG_like 53..145 CDD:214653 25/106 (24%)
ig 153..227 CDD:278476 11/87 (13%)
IG_like 161..>227 CDD:214653 8/72 (11%)
LRIT1NP_056428.1 LRR 1 60..81
leucine-rich repeat 61..84 CDD:275378
LRR_8 63..143 CDD:290566
LRR 2 84..105
leucine-rich repeat 85..132 CDD:275378
LRR 3 108..129
LRR_8 131..202 CDD:290566
LRR_4 131..171 CDD:289563
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275378
LRR 5 156..177
leucine-rich repeat 157..180 CDD:275378
leucine-rich repeat 181..205 CDD:275378 1/1 (100%)
TPKR_C2 201..>240 CDD:301599 8/37 (22%)
Ig 267..345 CDD:299845 21/87 (24%)
IG_like 267..345 CDD:214653 21/87 (24%)
FN3 431..498 CDD:214495 10/62 (16%)
LRR 6. /evidence=ECO:0000305 571..594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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