DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr4 and Lrit3

DIOPT Version :9

Sequence 1:NP_001014616.2 Gene:dpr4 / 3346160 FlyBaseID:FBgn0053512 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:305 Identity:63/305 - (20%)
Similarity:105/305 - (34%) Gaps:110/305 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RVRNLGDRAVSWIRKRDLHILTVGILTYTNDQRFQSLHSEGSDEWTLRISSPQ------PR---- 122
            |:.::.:.||.::  |:|..|.:      :..|..:|..:..|.|:....:|.      ||    
Mouse   140 RIASVPNEAVRYL--RNLTCLDL------SSNRLTTLPPDFLDSWSHLAVTPSRSPDFPPRRIIL 196

  Fly   123 ---DSGTY-ECQVS----------------------TEPKISQG-----------FRLNVVVSRA 150
               |:..: :|.:|                      :||:..||           .:.:|::|..
Mouse   197 GLQDNPWFCDCHISKVIELSKVTDHAVVLLDPLMVCSEPERFQGILFQRVELEKCLKPSVMMSAT 261

  Fly   151 KILGNAELFIKSGSDINLTCLAMQSPVPPSFIYWYKGK-RVMNYSQRGGINVITE---RSTRTSK 211
            ||..      ..||::.|.|.|...|.|.  :.|.:.. ..:||:      ||.|   ...|.|.
Mouse   262 KITS------ALGSNVLLRCDAKGHPTPQ--LTWTRSDGSTVNYT------VIQESPGEGIRWSI 312

  Fly   212 LLIAKATPADSGNYTCSP---SSSDSASVVVHVING-------------------EHPAAMQHGN 254
            :.:...:..|:|:|.|..   :....|.|.|.|:.|                   :||.....|:
Mouse   313 ISLTSISHKDAGDYRCKAKNLAGISEAVVTVTVVGGVTTTLSPDSSERSPGEPPEQHPQPGLGGS 377

  Fly   255 S--SATCLRPLSSTSVPFVLATWMSMTVASVAWNSNLNINWNWSP 297
            :  |.:.|.| ..||.|       |....|.|..::     .|||
Mouse   378 TPPSKSWLSP-GLTSAP-------SYPTPSAALYTS-----TWSP 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr4NP_001014616.2 V-set 53..146 CDD:284989 20/124 (16%)
IG_like 53..145 CDD:214653 20/123 (16%)
ig 153..227 CDD:278476 18/77 (23%)
IG_like 161..>227 CDD:214653 18/69 (26%)
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79
LRR_8 61..117 CDD:290566
LRR 2. /evidence=ECO:0000255 80..103
leucine-rich repeat 83..106 CDD:275378
LRR 3. /evidence=ECO:0000255 104..128
LRR_8 105..165 CDD:290566 6/32 (19%)
LRR_4 106..146 CDD:289563 1/5 (20%)
leucine-rich repeat 107..130 CDD:275378
LRR_4 129..170 CDD:289563 8/37 (22%)
LRR 4. /evidence=ECO:0000255 129..151 3/10 (30%)
leucine-rich repeat 131..154 CDD:275378 3/15 (20%)
LRR 5. /evidence=ECO:0000255 152..175 5/30 (17%)
leucine-rich repeat 155..168 CDD:275378 3/18 (17%)
Ig 254..335 CDD:299845 23/94 (24%)
IG_like 263..339 CDD:214653 20/89 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..391 6/41 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..464
FN3 489..563 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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