DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr4 and Ncam2

DIOPT Version :9

Sequence 1:NP_001014616.2 Gene:dpr4 / 3346160 FlyBaseID:FBgn0053512 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001106679.1 Gene:Ncam2 / 17968 MGIID:97282 Length:837 Species:Mus musculus


Alignment Length:270 Identity:61/270 - (22%)
Similarity:106/270 - (39%) Gaps:56/270 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 REVTA----TVGQAALLHCRVRNLGDRAVSWIRKRDLHILTVGILTYTNDQRFQSLHSEGSDEWT 113
            |||.:    ..|:.|.:.|||.:....||||:...: .:.|:      .|.||..|.:.     .
Mouse   118 REVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNE-EVTTI------PDNRFAVLANN-----N 170

  Fly   114 LRISSPQPRDSGTYECQVSTEPKISQGFRLNVVVSRA--KILGNAELF---IKSGSDINLTCLAM 173
            |:|.:....|.|.|.|:...|.:....||..:|:...  .|:...:.|   .:.|.::.|||.|.
Mouse   171 LQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAIMMPQKSFNATAERGEEMTLTCKAS 235

  Fly   174 QSPVPPSFIYWYKGKRVM----NYSQRGGINVITERSTRTSKLLIAKATPADSGNYTCSPSSSDS 234
            .||.|.  |.|::..:::    .|..:|....:|.|:      :|.|    |.|:|.|..::...
Mouse   236 GSPDPT--ISWFRNGKLIEENEKYILKGSNTELTVRN------IINK----DGGSYVCKATNKAG 288

  Fly   235 AS---------VVVHVINGEHPAAMQHGNSSATCLRPLSSTSVPFVLATWMSMTVASVAWNSNLN 290
            ..         |..|::..::....::|:.:..|    .:...|....|| ...:..|.::..  
Mouse   289 EDQKQAFLQVFVQPHILQLKNETTSENGHVTLVC----EAEGEPVPEITW-KRAIDGVMFSEG-- 346

  Fly   291 INWNWSPDWR 300
               :.|||.|
Mouse   347 ---DKSPDGR 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr4NP_001014616.2 V-set 53..146 CDD:284989 26/96 (27%)
IG_like 53..145 CDD:214653 26/95 (27%)
ig 153..227 CDD:278476 20/80 (25%)
IG_like 161..>227 CDD:214653 19/69 (28%)
Ncam2NP_001106679.1 Ig1_NCAM-2 21..112 CDD:143274
I-set 22..111 CDD:254352
I-set 117..193 CDD:254352 24/86 (28%)
IGc2 128..189 CDD:197706 20/72 (28%)
Ig 208..301 CDD:299845 22/104 (21%)
I-set 215..298 CDD:254352 21/94 (22%)
Ig 300..397 CDD:299845 12/64 (19%)
IG_like 308..395 CDD:214653 10/56 (18%)
IG_like 413..491 CDD:214653
IGc2 414..482 CDD:197706
FN3 496..588 CDD:238020
fn3 594..678 CDD:278470
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 764..810
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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