DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr4 and lrit3b

DIOPT Version :9

Sequence 1:NP_001014616.2 Gene:dpr4 / 3346160 FlyBaseID:FBgn0053512 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_009305418.1 Gene:lrit3b / 100144406 ZFINID:ZDB-GENE-070424-130 Length:487 Species:Danio rerio


Alignment Length:236 Identity:52/236 - (22%)
Similarity:79/236 - (33%) Gaps:42/236 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WTTDCP-RALKAICLVPLWLLLFLDCGMVGGEVPPHYWETPYS--------QPYFDNSSRREVTA 57
            |..||. ..|..|...|...|:.||..:...| |......|:.        :||...|:.: :||
Zfish   228 WVCDCRLSTLLDISRGPESSLVLLDRFLTCSE-PLDLAGVPFQSVELSRCRRPYVVTSATK-ITA 290

  Fly    58 TVGQAALLHCRVRNLGDRAVSWIRKRDLHILTVGILTYTNDQRFQSLHSEGSDEWTLRISSPQPR 122
            .:|...||.|........|:.||:....::...|....|.    .||.:|...:.........||
Zfish   291 LLGSTVLLRCEATGHPTPALMWIKSAKRNLYNQGCCKQTQ----SSLDTERFPKKLFGYVQESPR 351

  Fly   123 ----------------DSGTYECQVSTEPKISQG-FRLNVVVSRAKILGNAELFIKSGSDINLTC 170
                            |:|.|.|:......||:. ..||||...|:...     .|:......|.
Zfish   352 VGVRWSVVSLNGISYSDAGEYRCRAQNMAGISEAVVSLNVVGVMAEYTD-----FKNSDQQQTTT 411

  Fly   171 LAMQSPVPPSFIYWYKGKRVMNYSQRGGINVITERSTRTSK 211
            .:......|.    .|.|.:|..:..|.::.: :|..:|.|
Zfish   412 KSDSKRTKPK----QKSKAMMPRNMTGSLSPL-KRVLKTPK 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr4NP_001014616.2 V-set 53..146 CDD:284989 24/109 (22%)
IG_like 53..145 CDD:214653 23/108 (21%)
ig 153..227 CDD:278476 10/59 (17%)
IG_like 161..>227 CDD:214653 10/51 (20%)
lrit3bXP_009305418.1 LRRNT 51..92 CDD:214470
leucine-rich repeat 69..89 CDD:275380
LRR_8 112..172 CDD:290566
leucine-rich repeat 114..137 CDD:275378
leucine-rich repeat 138..161 CDD:275378
LRR_8 160..214 CDD:290566
LRR_4 160..201 CDD:289563
leucine-rich repeat 162..185 CDD:275378
leucine-rich repeat 186..199 CDD:275378
leucine-rich repeat 215..230 CDD:275378 1/1 (100%)
Ig 278..391 CDD:299845 26/117 (22%)
I-set 279..391 CDD:254352 26/116 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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