DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33557 and olig4

DIOPT Version :10

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001039180.1 Gene:olig4 / 734024 XenbaseID:XB-GENE-484736 Length:209 Species:Xenopus tropicalis


Alignment Length:121 Identity:43/121 - (35%)
Similarity:56/121 - (46%) Gaps:28/121 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DSNSSGSASGSGAAADSEDSQ-----------IGQEANPGG----------QENQGNHRRRPPRQ 64
            ||:...|.|.|......|..|           :||...|.|          ||||  |..   |.
 Frog     2 DSDCLSSRSSSPEFDRGESPQFLSGAMFQAHSVGQRMPPRGRVKAGKRELTQENQ--HEL---RL 61

  Fly    65 KINARERYRTFNVNSAYEALRNLIPTE--PMNRKLSKIEIIRLASSYITHLSSTLE 118
            |:|:|||.|..::|.|.:.||.::|..  |..||||||..:.||.:||..||::||
 Frog    62 KVNSRERQRMHDLNQAMDGLREVMPYSHGPSVRKLSKISTLILARNYIVMLSNSLE 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 25/55 (45%)
olig4NP_001039180.1 bHLH_TS_OLIG2_like 59..121 CDD:381568 27/62 (44%)

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