DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33557 and Tal2

DIOPT Version :10

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001102932.1 Gene:Tal2 / 685229 RGDID:1596467 Length:108 Species:Rattus norvegicus


Alignment Length:74 Identity:34/74 - (45%)
Similarity:42/74 - (56%) Gaps:10/74 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 NARERYRTFNVNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTL------ETGTECQP 125
            |.|||:|..:||||:..||.||||.|.::||||.|.:|||..||..|...|      :||...|.
  Rat     8 NTRERWRQQSVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQSLQQTGIAAQG 72

  Fly   126 CLL----HK 130
            .:|    ||
  Rat    73 NILGLFPHK 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 27/49 (55%)
Tal2NP_001102932.1 bHLH_TS_TAL2 2..62 CDD:381550 28/53 (53%)

Return to query results.
Submit another query.