DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33557 and Twist2

DIOPT Version :9

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_067723.1 Gene:Twist2 / 59327 RGDID:621286 Length:160 Species:Rattus norvegicus


Alignment Length:111 Identity:35/111 - (31%)
Similarity:54/111 - (48%) Gaps:17/111 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SEDSQ--IGQEANPGGQENQGNHRRRPPRQKINARERYRTFNVNSAYEALRNLIPTEPMNRKLSK 99
            |||..  .|:....|....|.....:..|...|.|||.||.::|.|:.|||.:|||.|.: ||||
  Rat    40 SEDGSPTPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSK 103

  Fly   100 IEIIRLASSYITHLSSTLETGTECQPCLLHKYESEGITRRISICTF 145
            |:.::||:.||..|...|              :|:.:..:::.|::
  Rat   104 IQTLKLAARYIDFLYQVL--------------QSDEMDNKMTSCSY 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 HLH 67..119 CDD:197674 26/51 (51%)
Twist2NP_067723.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63 6/22 (27%)
bHLH_TS_TWIST2 51..132 CDD:381543 30/95 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343476
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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