DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33557 and olig3

DIOPT Version :10

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001103863.1 Gene:olig3 / 566728 ZFINID:ZDB-GENE-080903-1 Length:255 Species:Danio rerio


Alignment Length:116 Identity:40/116 - (34%)
Similarity:58/116 - (50%) Gaps:18/116 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSSSSFSNYLMAVFAQDSNSSGSASGSGAAADSEDSQIGQEANPGGQENQGNHRRRPPRQKINAR 69
            :|.||..|.|:...|.: :.|.:.|||......:.::         ||.|      ..|.|||.|
Zfish    34 NSVSSTQNELLQKMASE-HLSKTPSGSKYKLKKQVTE---------QEIQ------QLRLKINGR 82

  Fly    70 ERYRTFNVNSAYEALRNLIPTE--PMNRKLSKIEIIRLASSYITHLSSTLE 118
            ||.|..::|.|.:.||.::|..  |..||||||..:.||.:||..|:|:|:
Zfish    83 ERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLD 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 26/55 (47%)
olig3NP_001103863.1 bHLH_TS_OLIG3 60..140 CDD:381511 30/89 (34%)

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