DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33557 and amos

DIOPT Version :10

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster


Alignment Length:172 Identity:42/172 - (24%)
Similarity:69/172 - (40%) Gaps:62/172 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SSSSFSNYLMAVFAQDSNSSGSASGSGAAADS--------------------EDSQIGQEANPGG 50
            |:.:|......::.|:.::|.|.| .||.:.|                    |..|...:|||.|
  Fly    25 SNDTFQQLEQLMYQQEFSTSDSQS-DGANSCSLEMYYDTPSVLELEHMLNAQEQQQHHLQANPLG 88

  Fly    51 QENQG-------NHRRRPPRQKI---------------------------------NARERYRTF 75
             :|||       ..:|..|..|:                                 |||||.|..
  Fly    89 -KNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANARERRRMN 152

  Fly    76 NVNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTL 117
            ::|.|::.||:::|:...:|:|||.|.:::|.:||..|.:.|
  Fly   153 SLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLL 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 21/86 (24%)
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 21/63 (33%)

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