DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33557 and twist2

DIOPT Version :10

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001005956.1 Gene:twist2 / 30395 ZFINID:ZDB-GENE-980526-235 Length:163 Species:Danio rerio


Alignment Length:152 Identity:42/152 - (27%)
Similarity:67/152 - (44%) Gaps:42/152 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DSNSSGSASGSGAAADSEDSQIGQEANPGGQENQG-------------NHRRRPP---------- 62
            :.:||...|...:...||:....|:...|.:..||             |.|.:.|          
Zfish     2 EESSSSPVSPVDSLVTSEEELDRQQKRFGRKRRQGRKSSEDSSSPSSVNKRNKKPSPSSTQSFEE 66

  Fly    63 --RQKI--NARERYRTFNVNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLETGTEC 123
              .|::  |.|||.||.::|.|:.:||.:|||.|.: |||||:.::|||.||..|...|      
Zfish    67 LQNQRVLANVRERQRTQSLNEAFASLRKIIPTLPSD-KLSKIQTLKLASRYIDFLCQVL------ 124

  Fly   124 QPCLLHKYESEGITRRISICTF 145
                    :|:.:..::|.|::
Zfish   125 --------QSDEMDNKMSSCSY 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 26/55 (47%)
twist2NP_001005956.1 bHLH_TS_TWIST1 59..135 CDD:381418 28/90 (31%)

Return to query results.
Submit another query.