DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33557 and neurod1

DIOPT Version :10

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_571053.1 Gene:neurod1 / 30169 ZFINID:ZDB-GENE-990415-172 Length:350 Species:Danio rerio


Alignment Length:149 Identity:45/149 - (30%)
Similarity:64/149 - (42%) Gaps:33/149 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVSSSSSSFSNYLMAVFAQDSNSSGSAS-------------GSGAAADSEDSQIGQEANPGGQE 52
            |..|.|||::::...: .:||.......|             |.....|.:|.:..:|...|   
Zfish    11 MLESQSSSNWTDKCHS-SSQDERDVDKTSEPMLNDMEDDDDAGLNRLEDEDDEEEEEEEEDG--- 71

  Fly    53 NQGNHRRRPP----------------RQKINARERYRTFNVNSAYEALRNLIPTEPMNRKLSKIE 101
            :....:||.|                |.|.|||||.|...:|.|.|:||.::|.....:||||||
Zfish    72 DDTKPKRRGPKKKKMTKARMQRFKMRRMKANARERNRMHGLNDALESLRKVVPCYSKTQKLSKIE 136

  Fly   102 IIRLASSYITHLSSTLETG 120
            .:|||.:||..||..|.:|
Zfish   137 TLRLAKNYIWALSEILRSG 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 27/53 (51%)
neurod1NP_571053.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..91 16/83 (19%)
Nuclear localization signal. /evidence=ECO:0000255 82..88 0/5 (0%)
bHLH_TS_NeuroD6_ATOH2 86..153 CDD:381565 27/66 (41%)
Neuro_bHLH 155..277 CDD:463621 1/1 (100%)

Return to query results.
Submit another query.