DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33557 and hnd-1

DIOPT Version :10

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_509952.1 Gene:hnd-1 / 183457 WormBaseID:WBGene00001981 Length:226 Species:Caenorhabditis elegans


Alignment Length:128 Identity:32/128 - (25%)
Similarity:54/128 - (42%) Gaps:34/128 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SSGSASGSGAAADSEDSQIGQEANPGGQENQGNHRRRPPRQKINARERYRTFNVNSAYEALRNLI 88
            |:.:.:.:.::.:|.||                  ::..::|...:|..|...:|||:|.|:..|
 Worm     4 STTAGNNAVSSLESTDS------------------KKSRKEKSREKEHRRAQCINSAFEILQQHI 50

  Fly    89 P--TEPMNRKLSKIEIIRLASSYITHLSSTLETG----TECQPCLLHKYESEGITR---RISI 142
            |  .....:.|.||:.:|||..||.||...|...    |:|.       ||..:|.   |::|
 Worm    51 PYLKSEERKSLPKIKTLRLAMQYIDHLKKLLGGNEMLETDCN-------ESRPLTHSDFRVNI 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 20/55 (36%)
hnd-1NP_509952.1 bHLH_TS_ASCL 24..81 CDD:381424 20/56 (36%)

Return to query results.
Submit another query.