DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33557 and Ptf1a

DIOPT Version :9

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_446416.1 Gene:Ptf1a / 117034 RGDID:621709 Length:326 Species:Rattus norvegicus


Alignment Length:102 Identity:34/102 - (33%)
Similarity:49/102 - (48%) Gaps:28/102 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SGSASGSGAAADSEDSQIGQEANPGGQENQGNHRRR--------PPRQKINARERYRTFNVNSAY 81
            :|:|:.:.|||                    ..|||        ..||..|.|||.|..::|.|:
  Rat   138 NGAAAAAAAAA--------------------RRRRRVRSEAELQQLRQAANVRERRRMQSINDAF 182

  Fly    82 EALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLE 118
            |.||:.|||.|..::|||::.:|||..||..||..::
  Rat   183 EGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQ 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 HLH 67..119 CDD:197674 24/52 (46%)
Ptf1aNP_446416.1 bHLH_TS_PTF1A 164..218 CDD:381423 26/53 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..249
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..326
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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