DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33557 and ptf1a

DIOPT Version :9

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:XP_002933181.5 Gene:ptf1a / 100494161 XenbaseID:XB-GENE-484425 Length:270 Species:Xenopus tropicalis


Alignment Length:112 Identity:41/112 - (36%)
Similarity:57/112 - (50%) Gaps:11/112 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FAQDSNSSGSASGSGAAADSEDSQIGQEANPG--GQENQGNHRRR--------PPRQKINARERY 72
            :....|.|.|:|.|| ....|..:.|.|.:||  |.......|||        ..||..|.|||.
 Frog    67 YCDAGNFSFSSSSSG-GFPYECGEGGCELSPGMKGGSLVMKRRRRLRSDAEMQQLRQAANVRERR 130

  Fly    73 RTFNVNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLET 119
            |..::|.|:|.||:.|||.|..::|||::.:|||..||..||..:::
 Frog   131 RMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQS 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 HLH 67..119 CDD:197674 24/51 (47%)
ptf1aXP_002933181.5 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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