DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33557 and tal1

DIOPT Version :9

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001135468.1 Gene:tal1 / 100196924 XenbaseID:XB-GENE-479827 Length:388 Species:Xenopus tropicalis


Alignment Length:127 Identity:47/127 - (37%)
Similarity:58/127 - (45%) Gaps:34/127 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ASGSGAAADSEDSQIGQEANPGGQENQGNHRRRP----------PRQKI------NARERYRTFN 76
            |||:....|.      .||.| ...|....:|||          |:.|:      |:|||:|..|
 Frog   214 ASGNSGYFDD------PEAYP-MFTNNSRVKRRPGPYEVEISEGPQTKVVRRIFTNSRERWRQQN 271

  Fly    77 VNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLETGTECQPCLLHKYESEGITR 138
            ||.|:..||.||||.|.::||||.||:|||..||..|:.           ||...|.||..|
 Frog   272 VNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAK-----------LLDDQEEEGNQR 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 HLH 67..119 CDD:197674 28/51 (55%)
tal1NP_001135468.1 PHA03247 <6..195 CDD:223021
bHLH_TS_TAL1 254..318 CDD:381549 32/74 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.