DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33557 and neurod4

DIOPT Version :10

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001124513.1 Gene:neurod4 / 100124310 XenbaseID:XB-GENE-972704 Length:316 Species:Xenopus tropicalis


Alignment Length:90 Identity:36/90 - (40%)
Similarity:48/90 - (53%) Gaps:5/90 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DSEDSQIGQEANPGGQENQGN-----HRRRPPRQKINARERYRTFNVNSAYEALRNLIPTEPMNR 95
            |.|:.:.|::....|.:.:..     .|.|..|.|.|||||.|...:|.|.|.||.::|.....:
 Frog    49 DDEEEEDGEKPKKRGPKKKKMTKARLERFRVRRVKANARERTRMHGLNDALENLRRVMPCYSKTQ 113

  Fly    96 KLSKIEIIRLASSYITHLSSTLETG 120
            ||||||.:|||.:||..||..||.|
 Frog   114 KLSKIETLRLARNYIWALSDILEQG 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 27/53 (51%)
neurod4NP_001124513.1 bHLH_TS_NeuroD4_ATOH3 <69..137 CDD:381564 30/67 (45%)
Neuro_bHLH 138..256 CDD:463621 1/1 (100%)

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