DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33557 and si:ch211-246m6.4

DIOPT Version :10

Sequence 1:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster
Sequence 2:XP_001340709.1 Gene:si:ch211-246m6.4 / 100000527 ZFINID:ZDB-GENE-050208-498 Length:193 Species:Danio rerio


Alignment Length:155 Identity:63/155 - (40%)
Similarity:79/155 - (50%) Gaps:46/155 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DSNSSGSASGSGAAADSEDSQIGQEANPGGQENQGN---HRRR---------PPRQKINARERYR 73
            ||.|..|...:||                |...:|:   .|||         ..||..|||||.|
Zfish    47 DSGSDSSEKSTGA----------------GSPTRGHREVRRRRGSRRLAGVSKQRQAANARERDR 95

  Fly    74 TFNVNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLETGTEC---QPCLLHKY---- 131
            |.:||:|:.:||.||||||.:|||||||.:|||||||:||::.|..|.:|   ||||  ||    
Zfish    96 THSVNTAFTSLRTLIPTEPADRKLSKIETLRLASSYISHLANVLLLGEDCRDGQPCL--KYHNIL 158

  Fly   132 ------ESEGITRRISICTFCLKTK 150
                  :|..:.   .||||||..:
Zfish   159 QSNANLKSPPVR---PICTFCLSNQ 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 36/53 (68%)
si:ch211-246m6.4XP_001340709.1 bHLH_TS_scleraxis_like 85..139 CDD:381471 36/53 (68%)

Return to query results.
Submit another query.