Sequence 1: | NP_001014703.1 | Gene: | CG33521 / 3346141 | FlyBaseID: | FBgn0250819 | Length: | 663 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_003467.1 | Gene: | CSRP3 / 8048 | HGNCID: | 2472 | Length: | 194 | Species: | Homo sapiens |
Alignment Length: | 225 | Identity: | 49/225 - (21%) |
---|---|---|---|
Similarity: | 80/225 - (35%) | Gaps: | 62/225 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 80 CHQCKKPVYKMEEVILSLKTATTIFHKTCLRCKDCGKHLKFDSYNVHDGSLYCSMHFKLIFAPKV 144
Fly 145 V--------------------YEEFTPRKAELIIRENQPIKLPPDVAKASDKPSLGLDELQELNL 189
Fly 190 RSKFKVFENGYEEHNNNLRERQDIAITHSKSIQSTLTKFHGLGIPNSELTKLDDKNSDNNSDGDG 254
Fly 255 DMNF-MCLKKEIERETPVGLGEAMNDIRSK 283 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG33521 | NP_001014703.1 | LIM_Mical_like_2 | 80..136 | CDD:188829 | 19/55 (35%) |
CSRP3 | NP_003467.1 | Interaction with TCAP. /evidence=ECO:0000269|PubMed:12507422 | 1..5 | ||
LIM1_CRP3 | 9..62 | CDD:188865 | 19/55 (35%) | ||
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P50463, ECO:0000255 | 64..69 | 0/4 (0%) | |||
Interaction with CLF2 and isoform 2. /evidence=ECO:0000269|PubMed:19752190, ECO:0000269|PubMed:24860983 | 94..105 | 2/11 (18%) | |||
LIM2_CRP3 | 120..173 | CDD:188866 | 18/86 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |