DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33521 and csrp1b

DIOPT Version :9

Sequence 1:NP_001014703.1 Gene:CG33521 / 3346141 FlyBaseID:FBgn0250819 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001074083.1 Gene:csrp1b / 791132 ZFINID:ZDB-GENE-070112-252 Length:192 Species:Danio rerio


Alignment Length:82 Identity:27/82 - (32%)
Similarity:38/82 - (46%) Gaps:10/82 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SKKAQSLFRSTIPEKVENCHQCKKPVYKMEEVILSLKTATTIFHKTCLRCKDCGKHLKFDSYNVH 126
            ||.||.|..|.:      |.:|...|:..|:|:    .....:||:|.||..|||.|:..:....
Zfish   106 SKFAQKLGGSDV------CPRCGNAVFAAEKVV----GGGNSWHKSCFRCAKCGKSLESTTLADK 160

  Fly   127 DGSLYCSMHFKLIFAPK 143
            ||.:||...:...|.||
Zfish   161 DGEIYCKGCYAKNFGPK 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33521NP_001014703.1 LIM_Mical_like_2 80..136 CDD:188829 18/55 (33%)
csrp1bNP_001074083.1 LIM 7..62 CDD:295319
LIM2_CRP 118..171 CDD:188787 18/56 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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