DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33521 and lima1

DIOPT Version :9

Sequence 1:NP_001014703.1 Gene:CG33521 / 3346141 FlyBaseID:FBgn0250819 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001072345.1 Gene:lima1 / 779798 XenbaseID:XB-GENE-987339 Length:715 Species:Xenopus tropicalis


Alignment Length:626 Identity:122/626 - (19%)
Similarity:211/626 - (33%) Gaps:211/626 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SKISFGNGL---------PLKKKKTK----KSKTNEYDN-----QNI------------------ 37
            ||:|....|         |||.:..|    .||.||..|     :|:                  
 Frog   231 SKLSSTRSLEDSPILQATPLKDRMAKYQAALSKQNEVKNHSDHKENVPPSQLNNASSPDHEKILV 295

  Fly    38 ---------NMKKSFTKFDDLQKRN----------VIHVRSRDSKKAQSLFRSTIPEKVENCHQC 83
                     |...::.|::::|:.:          |::.......|:...|:  :|.: |.|..|
 Frog   296 NENSPVISRNTSDNYEKYEEIQRSSSSPDYSPQSRVLNTMEPSPPKSVKKFQ--LPAR-EVCFSC 357

  Fly    84 KKPVYKMEEVILSLKTATTIFHKTCLRCKDCGKHLKFDSYNVHDGSLYCSMHFKLIFAPKVVYE- 147
            :|.||.||.:..:    ..::|..|.||..|...|...::....|::||..||..:|..|..|: 
 Frog   358 QKTVYPMERLFAN----NQVYHNGCFRCSHCSTKLSLGTFASLHGTVYCKPHFNQLFKSKGNYDE 418

  Fly   148 --------EFTPRKAELIIRENQPIKLPPDVAKASDKPSLGLDELQELNLRSKFKVFENGYEEHN 204
                    |....|.|....|..|.:....::|....|     .::|..: :|..|.....|..|
 Frog   419 GFGHKPHKELWVNKTETSETEESPEQTTAHISKDPSSP-----VVEEAPI-AKVGVLAASMEAKN 477

  Fly   205 NNLRERQDIAITHSKSIQSTLTKFHGLGIPNSELTKLDDKNSDNNSDGDGDMNFMCLKKEIERET 269
            ::.::::       |.:::...|.  ...|.:|         .:.:.|.|:.|...|:   .:..
 Frog   478 SSAQDKE-------KQVETKRLKI--AWPPPAE---------SSGAGGSGEENIKVLR---PKWP 521

  Fly   270 PVGLGEAMNDIRSKFEQGDLMAKEGRREERKQEIQNIRSRLFLGKQAKIKEMYKLAVAESEQPVT 334
            ||      .:|:....:.||..|:.||....:|    |||.::           |:||   :||.
 Frog   522 PV------EEIQKVETEEDLDLKKLRRSGSLRE----RSRAYI-----------LSVA---KPVD 562

  Fly   335 SVGKTPDICAIKPTQEIKNRFENGEVYKDSKILSSEVSCGIHEDADVFESGISKASRNIFMKLDA 399
            |.....::.|..|..:..|.|:    .:|:.|...|....:.|:        :|.|::|      
 Frog   563 SDKALDNLPASPPKLKKSNSFK----LRDTWIKKPEERQSVEEE--------NKPSQDI------ 609

  Fly   400 NIKSGLSNHVQYTLPDKKYQIHN--QKVQENSDV---EIVKSDSKPEEVKVATEELSKKFKFFET 459
                   ..|.....||:....:  .||.|:.||   |:.:....|||   :||......:  :.
 Frog   610 -------KDVSVVAEDKEANPADLADKVLESEDVSKIEVAEQQHSPEE---STETSHSSLE--DP 662

  Fly   460 YSPAENKKRIFRMTPPREGVVMFPPPDSETNQQISTTLFNDNILQKTKTTSTILNKFREMEEQKM 524
            .||....                 |.::..:|.:...                  :..|.||..:
 Frog   663 VSPKNTS-----------------PEENRRSQDVGYW------------------EGEEFEELSV 692

  Fly   525 SDQQKKKNPKPLKCFTPPPEISHQFIRSDTEEESDSDYEQN 565
            .||.|:.                   |...|::.|.|.|:|
 Frog   693 EDQIKRN-------------------RYYDEDDEDVDGEEN 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33521NP_001014703.1 LIM_Mical_like_2 80..136 CDD:188829 16/55 (29%)
lima1NP_001072345.1 LIM_Eplin_alpha_beta 354..406 CDD:188869 16/55 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R12995
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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