| Sequence 1: | NP_001014703.1 | Gene: | CG33521 / 3346141 | FlyBaseID: | FBgn0250819 | Length: | 663 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001107017.1 | Gene: | Lima1 / 65970 | MGIID: | 1920992 | Length: | 753 | Species: | Mus musculus |
| Alignment Length: | 538 | Identity: | 115/538 - (21%) |
|---|---|---|---|
| Similarity: | 191/538 - (35%) | Gaps: | 169/538 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 SLNPQSSKISFGNGLPLKKKKTKKSKTNEYD-----------------------NQNINMKKSFT 44
Fly 45 KFDDL-------QKRNVIHVR----------------SRDSKKAQSLFRSTIPEKVENCHQCKKP 86
Fly 87 VYKMEEVILSLKTATTIFHKTCLRCKDCGKHLKFDSYNVHDGSLYCSMHFKLIFAPKVVYEEFTP 151
Fly 152 RK------------AELIIRENQPIKLPPDVAKASDKPSLGLDELQELNLRSKFKVFENGYEEHN 204
Fly 205 NNLRERQDIAITHSKSIQSTL---TKFHGLGIPNSELTKL-------DDKNSDNNSDGDGDMNFM 259
Fly 260 CLK-----KEIERETPVGLGEAMNDIRSKFEQGDLMAKEGRREERKQEIQNIRSRLFLGKQAKIK 319
Fly 320 EMYKLAVAESEQPVTSVGKTPDICAIKPTQEIKN----RFENGEVYKDSKILSSEVSCGIHEDAD 380
Fly 381 VFESGISKASRNIFMKLDANIKSGLSNHVQY-----------------TLPDKKYQIHNQKVQEN 428
Fly 429 S--DVEIVKSDSKPEEVK 444 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG33521 | NP_001014703.1 | LIM_Mical_like_2 | 80..136 | CDD:188829 | 18/55 (33%) |
| Lima1 | NP_001107017.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 46..66 | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 82..186 | ||||
| Required for interaction with NPC1L1. /evidence=ECO:0000269|PubMed:29880681 | 164..166 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 276..326 | 11/53 (21%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 341..379 | 2/37 (5%) | |||
| LIM_Eplin_alpha_beta | 388..440 | CDD:188869 | 18/55 (33%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 467..493 | 7/31 (23%) | |||
| Required for interaction with MYO5B. /evidence=ECO:0000269|PubMed:29880681 | 491..511 | 3/23 (13%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 505..669 | 37/208 (18%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 682..703 | 3/21 (14%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R12995 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.940 | |||||