DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33521 and lima1a

DIOPT Version :9

Sequence 1:NP_001014703.1 Gene:CG33521 / 3346141 FlyBaseID:FBgn0250819 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_571739.1 Gene:lima1a / 64000 ZFINID:ZDB-GENE-001120-1 Length:629 Species:Danio rerio


Alignment Length:590 Identity:103/590 - (17%)
Similarity:175/590 - (29%) Gaps:256/590 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QKRNVIHVRSRDSKKAQSLFRSTIPEK----------------------VENCHQCKKPVYKMEE 92
            ||.||..| |.|.....:..:|..|::                      .|.|..|.|.||.:|:
Zfish   235 QKENVPPV-SADVCPESNTIKSPAPDRNGSVLSPEQNQPKLVKMFPLPVRETCVTCLKTVYPLEK 298

  Fly    93 VILSLKTATTIFHKTCLRCKDCGKHLKFDSYNVHDGSLYCSMHFKLIFAPKVVYEEFTPRKAELI 157
            ::.:.:    |:|.||.||..|...|...:|.....::||..|:..:|..|..|:|....:....
Zfish   299 LVANQQ----IYHNTCFRCAYCNTKLSLVNYASLHNNVYCKPHYCQLFKAKGNYDEGFGHRPHKE 359

  Fly   158 IRENQPIKLPPDVAKASDKPSLGLDE--LQELNLRSKFKVFENGYEEHNNNLRERQDIAITHSKS 220
            :.|.:|..:...|..:..:.||.::|  |.::|:                       :|.|....
Zfish   360 LWEGRPEGVDDQVKLSPQETSLTVEESPLVKVNV-----------------------LAATLETR 401

  Fly   221 IQSTLTKFHGLGIPNSELTKLDDKNSDNNSDGDGDMNFMCLKKEIERETPVGLGEAMNDIRSKFE 285
            .|:|                                     .:.:|:....|             
Zfish   402 TQAT-------------------------------------SERVEKPLETG------------- 416

  Fly   286 QGDLMAKEGRREERKQEIQNIRSRLFLGKQAKIKEMYKLAVA---ESEQPVTSVGKTPDICAIKP 347
                                                 :|.::   :||...::.....|...|||
Zfish   417 -------------------------------------RLKISWPPQSEGDESATHTVTDGSGIKP 444

  Fly   348 TQEIKNRFENGEVYKDSKILSSEVSCGIHEDADVFESGISKASRNIFMKLDANIKSGLSNHVQYT 412
            .:                                                               
Zfish   445 IR--------------------------------------------------------------- 446

  Fly   413 LPDKKYQIHNQKVQENSDVEIVKSDSKPEEVKVATEELSKKFKFFETYSPAENKKRIFRMTPPRE 477
               .|:......|..|.|:|   ||.......|:.:|.||.|..|:: :|....||..| :|..|
Zfish   447 ---PKWPPEGDTVSSNVDLE---SDLPKLRRSVSLKERSKPFCIFDS-APVAQPKRCQR-SPSNE 503

  Fly   478 GVVMFPPPDSE-----TNQQISTTLFNDNILQKTKTTSTILNKFRE---MEEQKMSDQQKKKNPK 534
                  .||||     .:....||:.::::.:..::.....:|.:|   ||.::..|.|::: ..
Zfish   504 ------KPDSEEEMSPVSSTTDTTISSEDMTEHNQSEEEDQDKTKEDEQMEHEEKVDVQEEE-LS 561

  Fly   535 PLKCFTP---PPEISHQFIRSDTEEESDSDYEQNSEND-------EESEINPS----------NS 579
            .|||.||   ||        ...|.||..|.|:|..:.       ||:|.:.:          |.
Zfish   562 SLKCSTPDNSPP--------LSPESESGLDPEENQASQDVGFWDGEEAEEDTADVTVEDLIKRNR 618

  Fly   580 YYNDK 584
            :|:|:
Zfish   619 HYDDE 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33521NP_001014703.1 LIM_Mical_like_2 80..136 CDD:188829 17/55 (31%)
lima1aNP_571739.1 LIM_Eplin_alpha_beta 286..338 CDD:188869 17/55 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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