DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33521 and lasp1

DIOPT Version :10

Sequence 1:NP_001014703.1 Gene:CG33521 / 3346141 FlyBaseID:FBgn0250819 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001008445.1 Gene:lasp1 / 493322 XenbaseID:XB-GENE-1008926 Length:258 Species:Xenopus tropicalis


Alignment Length:175 Identity:38/175 - (21%)
Similarity:61/175 - (34%) Gaps:38/175 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 NCHQCKKPVYKMEEVILSLKTATTIFHKTCLRCKDCGKHLKFDSYNVHDGSLYCSMHFKLIFAPK 143
            :|.:|.|.||..|:|    ......:||.|..|:.|...|...:|..:|...||:.|:     ||
 Frog     4 SCARCGKIVYPTEKV----NCLDKFWHKACFHCEICKMTLNMKNYKGYDKKPYCNAHY-----PK 59

  Fly   144 VVYEEFTPRKAELIIRE----NQPIKLPPDVAK--------ASDKPSL-----GLDELQELNLRS 191
            ..:.........|.:::    ...::...|..|        .:|.|.|     ..|::..:....
 Frog    60 QSFTTVADTPENLRLKQQSELQSQVRYKEDFEKNKGKGFSVVADTPELQRIKKTQDQISNIKYHE 124

  Fly   192 KFKVFENGYEEHNNNL-------RERQDIAITHSKSIQSTLTKFH 229
            :|.....|     |.|       |...|....:.:|.|||..:.|
 Frog   125 EFDKSRMG-----NPLVDGDDFDRRGSDDGANYRRSSQSTPQQHH 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33521NP_001014703.1 LIM_Mical_like_2 80..136 CDD:188829 17/55 (31%)
lasp1NP_001008445.1 LIM_LASP 5..57 CDD:188831 17/55 (31%)
Nebulin 67..94 CDD:459977 3/26 (12%)
NEBU 98..128 CDD:128523 5/29 (17%)
SH3_Lasp1_C 200..258 CDD:212867
Blue background indicates that the domain is not in the aligned region.

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