DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hrs and tom1l2

DIOPT Version :9

Sequence 1:NP_525099.3 Gene:Hrs / 33458 FlyBaseID:FBgn0031450 Length:760 Species:Drosophila melanogaster
Sequence 2:XP_009304960.1 Gene:tom1l2 / 560327 ZFINID:ZDB-GENE-061013-3 Length:527 Species:Danio rerio


Alignment Length:546 Identity:120/546 - (21%)
Similarity:184/546 - (33%) Gaps:148/546 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKKMN-SPNPHSSCYSLLVLESIVKNC 73
            :|.||.......||...:.|||.||:.:..||:|..|:||::| :.|......:|.|||:.||||
Zfish    17 IERATDGSLQSEDWTLNMEICDIINETEDGPKDAMRAVKKRLNGNKNYREVMLTLTVLETCVKNC 81

  Fly    74 GAPVHEEVFTKENCEMFSSFLES------TPHEN----VRQKMLELVQTWAYAFRSSDKYQAIKD 128
            |...|..|.|::       |::.      :|..|    |:.|:|.|:|.||.|||||.....:..
Zfish    82 GYRFHMLVTTRD-------FIDGVLVKIISPKNNPPAIVQDKVLALIQAWADAFRSSPDLTGVVH 139

  Fly   129 TMTILKAKGHTFP--ELREADAMFTADTAPNWADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC 191
            ....:|.||..||  ||.....:.|...                                   |.
Zfish   140 VYEEMKRKGIEFP
RSELETLSPIHTPQR-----------------------------------QQ 169

  Fly   192 TAKQCPLPKYGIEKEVRVCDGCFAALQRPTSGSGGAKSGPRPADS---ELPAEYLNSTLAQ-QVQ 252
            ||.:....||.            |.:|        .|..|.||.:   ..|..:.:..:.. .:.
Zfish   170 TAPEMDQQKYS------------APVQ--------PKPQPHPASAPPFTAPVAHTSPQMPNLHIA 214

  Fly   253 TPARKT-EQELKEEEELQLALA--------LSQSEAEQQKPK----LQSLPPAAYRMQQR----- 299
            .|...: ||..|...||.:...        |::....|:.|.    ||.|......||||     
Zfish   215 GPINPSPEQICKLRSELDIVRGNTKVMSEMLTEMVPGQEDPSDHELLQELNRTCRAMQQRIVELI 279

  Fly   300 -SPSPEAPPEP---------------KEYHQ----QPEEATNPELAKYLNRSYWEQRKISESSSM 344
             ..|.|...|.               :.|.:    :..:..|..|.:.||.:       :|.:.:
Zfish   280 SRVSNEEVTEELLHVNDDLNNIFLRYERYERFRSGRTAQGVNNGLREVLNEA-------TEDNLI 337

  Fly   345 ----ASPSAPSP----MPPTPQPQQIMPLQVKSADEVQIDEFAANMRTQVEIFVNRMKSNSSRGR 401
                .||:..||    .||:..|..:.|  |:||..|.:....|.:....:.....:.|.::...
Zfish   338 DLGPGSPAVVSPRISATPPSSLPPSVAP--VRSASPVTLSSRLAGLDVGSDSVSGTLSSLATCQP 400

  Fly   402 SISNDSSVQTLFMTLTSLHSQQLSYIKEMDDKRMWYEQLQDKLTQIKDSRAALDQLR-------- 458
            ....|...||...|:....|......|.........:..|...|...|..:.:|.:.        
Zfish   401 QDDFDMFAQTRTGTVPEWKSAPFEDTKASSGVAPTLDVRQQNATAALDQSSVMDDIEEWLSTDVK 465

  Fly   459 ----QEHV--EKLRRIAEEQERQRQM 478
                :|.|  |:..:..||:.:..:|
Zfish   466 GDEGEEGVTSEEFDKFLEERAKAAEM 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HrsNP_525099.3 VHS_Hrs_Vps27p 2..143 CDD:239626 50/145 (34%)
FYVE_Hrs 157..217 CDD:277260 6/59 (10%)
Hrs_helical 377..471 CDD:289018 15/107 (14%)
GBP_C <456..520 CDD:303769 6/37 (16%)
coiled coil 501..512 CDD:293879
tom1l2XP_009304960.1 VHS_Tom1 12..152 CDD:239623 48/141 (34%)
GAT_TM1L2 221..312 CDD:260096 19/90 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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