DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hrs and Tom1l2

DIOPT Version :9

Sequence 1:NP_525099.3 Gene:Hrs / 33458 FlyBaseID:FBgn0031450 Length:760 Species:Drosophila melanogaster
Sequence 2:XP_006532924.1 Gene:Tom1l2 / 216810 MGIID:2443306 Length:528 Species:Mus musculus


Alignment Length:559 Identity:129/559 - (23%)
Similarity:192/559 - (34%) Gaps:163/559 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FRSSFDKNLENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKKMN-SPNPHSSCYSLLV 65
            |.:...:.||.||.......||...:.|||.||:.:..||:|..|:||::: :.|......:|.|
Mouse     9 FSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLSGNRNYREVMLALTV 73

  Fly    66 LESIVKNCGAPVHEEVFTKENCEMFSSFLES------TPHEN----VRQKMLELVQTWAYAFRSS 120
            ||:.|||||...|..|..::       |::|      :|..|    |:.|:|.|:|.||.|||||
Mouse    74 LETCVKNCGHRFHLLVANRD-------FIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFRSS 131

  Fly   121 DKYQAIKDTMTILKAKGHTFPELREADAMFTADT----APNWADGRVCHRCRVEFTFTNRKHHCR 181
            .....:......||.:|..|| :.:.||:....|    .|.........|.:.:           
Mouse   132 PDLTGVVHIYEELKRRGIEFP-MADLDALSPIHTPQRSVPEMDPAATIPRSQTQ----------- 184

  Fly   182 NCGQVFCGQCTAKQCPLPKYGIEKEVRVCDGCFAALQRPTSGSGGAKSGPRPAD-SELPAEYLNS 245
                                                .|.|:|:   .|.|.||. |.|.|..|:.
Mouse   185 ------------------------------------PRTTAGT---YSSPPPASYSTLQAPALSV 210

  Fly   246 T---LAQQVQTPARKTEQEL-----KEEEELQLALALSQSEAEQQKPKLQSLPPAAYRMQQR--- 299
            |   .|...|....::|.::     |...|:...:...|.::...: .||.|......||.|   
Mouse   211 TGPITANSEQIARLRSELDIVRGNTKVMSEMLTEMVPGQEDSSDLE-LLQELNRTCRAMQHRIVE 274

  Fly   300 ---SPSPEAPPEPKEYHQQPEEATNPELAKYLNRSYWEQRKISESSS---------------MAS 346
               ..|.|...|  |.....::..|..|.......|...|.:..:|:               ..|
Mouse   275 LISRVSNEEVTE--ELLHVNDDLNNVFLRYERFERYRSGRSVQNASNGVLSEVTEDNLIDLGPGS 337

  Fly   347 PSAPSPM-----PPTPQPQQIMPL---------------QVKSADEVQIDEFA-------ANMRT 384
            |:..|||     ||:....|:..|               |.|..|  ..|.||       |..|.
Mouse   338 PAVVSPMVGSTAPPSSLSSQLAGLDLGTESVSGTLSSLQQCKPQD--GFDMFAQTRGNSLAEQRK 400

  Fly   385 QV------------EIFVNRMKSNSSRGRSISNDSSVQTLFMTLTSLHSQQLSYIKEMDDKRMWY 437
            .|            ....||.:::..|||  ..||.:|.:...|.:.....::....|||..:|.
Mouse   401 TVTYEDPQAVGGLASALDNRKQNSEMRGR--GGDSDLQPIDSWLMTQGMIPVAQPSVMDDIEVWL 463

  Fly   438 EQLQDKLTQIKDSRAALDQLRQEHV--EKLRRIAEEQER 474
            .      |.:|.     |.| :|.|  |:..:..||:.:
Mouse   464 R------TDLKG-----DDL-EEGVTSEEFDKFLEERAK 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HrsNP_525099.3 VHS_Hrs_Vps27p 2..143 CDD:239626 51/151 (34%)
FYVE_Hrs 157..217 CDD:277260 1/59 (2%)
Hrs_helical 377..471 CDD:289018 25/114 (22%)
GBP_C <456..520 CDD:303769 6/21 (29%)
coiled coil 501..512 CDD:293879
Tom1l2XP_006532924.1 VHS_Tom1L2 12..148 CDD:340793 47/142 (33%)
GAT_TM1L2 218..309 CDD:260096 17/93 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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