DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc1 and TPR12

DIOPT Version :10

Sequence 1:NP_995615.2 Gene:Tmtc1 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_177936.1 Gene:TPR12 / 844148 AraportID:AT1G78120 Length:530 Species:Arabidopsis thaliana


Alignment Length:315 Identity:73/315 - (23%)
Similarity:112/315 - (35%) Gaps:102/315 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   509 FRSAISINP--PKALGNLGSVLSAQGRYEEAELTLRMTLGHRPTMADAH-------FNLGVVHQK 564
            :..|||.:|  |....|..:.|.:.||..||.......|...||...||       ..||.|.:.
plant   182 YERAISADPKTPTYWSNKSAALISLGRLLEASDACEEALRLNPTYERAHQRLASLQLRLGEVEKA 246

  Fly   565 QLNFSSA---------------IPCFRRAIELRPQ-----------LAVAY--------LNLGT- 594
            ..:::.|               :.|.||..|.|..           .|::|        ..|.| 
plant   247 LCHYNEAGKYTETKHIEQVEDVVKCLRRCDEARRSKEWNVALKETLFAISYGADSSPRVYALQTE 311

  Fly   595 SLISLGDHRQEAISVLRTGA-RLE-GSGVRDRGAHVEARYTCYLQL--SVLYRSDGRLQDAAAAL 655
            :|:.|..| :||.||.:.|. |.: .|.::..|..:    |.||.:  :.:|.:.||.:||..|.
plant   312 ALLHLQRH-EEAYSVYQKGTKRFDIDSFIKIFGLSL----TSYLLMVGAQVYIAVGRFEDAVTAS 371

  Fly   656 RESLKALP------LLPQKQRAVLHLRL-GEIL-------------------------------- 681
            |::.:..|      .:.:|.|||...|| |.:|                                
plant   372 RQAARLDPSSEEVNAVARKARAVASARLSGNLLFNASKFEGASVVYTEGLENDPYNALLLCNRAA 436

  Fly   682 --AELQDWNEAEHQQRLAMQLQPEQGAAYVTYGQTLARNGSRLAEAESWFKRALQ 734
              .:|..:.:|.....||:.|||       :|.:...|.....|:.|.| :.|:|
plant   437 SRFKLDLFEKAIEDCTLALSLQP-------SYRKARRRRADSYAKLEKW-QHAIQ 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc1NP_995615.2 ArnT 11..>209 CDD:441412
TMTC_DUF1736 271..340 CDD:462468
PilF 501..585 CDD:442297 25/110 (23%)
TPR repeat 518..546 CDD:276809 7/27 (26%)
TPR repeat 551..581 CDD:276809 9/51 (18%)
LapB 556..838 CDD:442196 57/259 (22%)
TPR repeat 586..611 CDD:276809 11/33 (33%)
TPR repeat 634..660 CDD:276809 9/27 (33%)
TPR repeat 671..699 CDD:276809 10/62 (16%)
TPR repeat 704..735 CDD:276809 7/31 (23%)
TPR repeat 740..768 CDD:276809
TPR repeat 773..803 CDD:276809
TPR repeat 808..836 CDD:276809
TPR12NP_177936.1 LapB 155..385 CDD:442196 51/207 (25%)
TPR repeat 159..187 CDD:276809 1/4 (25%)
TPR repeat 192..222 CDD:276809 8/29 (28%)
TPR repeat 227..253 CDD:276809 5/25 (20%)
TPR 303..>486 CDD:440225 46/194 (24%)
TPR repeat 427..457 CDD:276809 4/29 (14%)
TPR repeat 462..486 CDD:276809 6/23 (26%)
Blue background indicates that the domain is not in the aligned region.

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