DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc1 and AT5G63200

DIOPT Version :10

Sequence 1:NP_995615.2 Gene:Tmtc1 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_201125.2 Gene:AT5G63200 / 836441 AraportID:AT5G63200 Length:649 Species:Arabidopsis thaliana


Alignment Length:575 Identity:127/575 - (22%)
Similarity:201/575 - (34%) Gaps:188/575 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 EVANISLPLL---RRLGGNS-CHTWLGLTCD--CHHQLSAPSYRSASAIYSTSSKSKSASWTAAP 418
            :::|:.:.|:   |::..|: .|..|||...  ...|.:.|.|..|..|                
plant   121 KISNLKMGLIHVARKMPKNAHAHFILGLMFQRLGQSQKAIPEYEKAEEI---------------- 169

  Fly   419 ILGTAFLVLPFLPASNLLFYVGFVMAERVLYLPSVGYCLLFGLGFG--------------HLWQR 469
            :||..    |.:....||..|..          ..|.|||.. |||              .:..:
plant   170 LLGCE----PEIARPELLLLVQI----------HHGQCLLLD-GFGDTDSVKELEGEELEEILSK 219

  Fly   470 VNSS----------WRS-RLMLLCGLALLLGVHGVRTFRRNLDWRDEEQLFRSAISINPPK--AL 521
            :..|          |.: .||||....|:..:                .:..|.:::.|..  .|
plant   220 LKDSIKLDVRQAAVWNTLGLMLLKAGCLMSAI----------------SVLSSLLALVPDNYDCL 268

  Fly   522 GNLGSVLSAQGRYEEA-----ELTLR--------------MTLGHRPTMADAHFNLG--VVHQKQ 565
            .|||......|..|.:     :|.|:              :...|..|:|.|..|.|  ....::
plant   269 ANLGVAYLQSGDMELSAKCFQDLVLKDHNHPAALINYAAELLCKHSSTVAGAGANGGADASEDQK 333

  Fly   566 LNFSSAIPCFRRAIELRPQLAVAYLNLGTSLISLGDHRQEAISVLRTGARLEGSGVRDRGAHVEA 630
            ...:.|..|...|:...|:.|.|::||..|...:||||..: ..|...|:|:.:.:..|.|....
plant   334 APMNVAKECLLAALRSDPKSAHAWVNLANSYYMMGDHRSSS-KCLEKAAKLDPNCMATRFAVAVQ 397

  Fly   631 RYTCYLQLSVLYRSDGRLQDA-----------AAALRESLKALPLLPQKQRAVLHLRLGEILAEL 684
            |          .:...|.|||           |:.:||. :::|:.|....|.|           
plant   398 R----------IKDAERSQDASDQLSWAGNEMASVIREG-ESVPIDPPIAWAGL----------- 440

  Fly   685 QDWNEAEHQQRLAMQLQPEQGAAYVTYGQTLARNGSRLAEAESWFKRALQLAPLEPSSHHHYADF 749
                      .:|.:.|.|..||:|.       :.:.|.|.|.....:|:.|..|..        
plant   441 ----------AMAHKAQHEIAAAFVA-------DRNELTEMEERAVYSLKQAVTEDP-------- 480

  Fly   750 LEQQERHHEALGLRLRAAALAPQDYTLQ------------------SCVADALRLLNRLAEAELW 796
             |...|.|: |||.    :|..|.|.|.                  |.:..:|:|.:..:|||..
plant   481 -EDAVRWHQ-LGLH----SLCSQQYKLSQKYLKAAVGRSRECSYAWSNLGISLQLSDEHSEAEEV 539

  Fly   797 YRKAVTLQPMAAHAHA---NLGAILQMRGLRKEAVACYHKALELQPGHAISRANL 848
            |::|:|:. ....|||   |||.:.:.:...:.:.|.:.|||||:||:|.:..||
plant   540 YKRALTVS-KEDQAHAILSNLGNLYRQKKQYEVSKAMFSKALELKPGYAPAYNNL 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc1NP_995615.2 ArnT 11..>209 CDD:441412
TMTC_DUF1736 271..340 CDD:462468
PilF 501..585 CDD:442297 20/106 (19%)
TPR repeat 518..546 CDD:276809 8/48 (17%)
TPR repeat 551..581 CDD:276809 7/31 (23%)
LapB 556..838 CDD:442196 74/315 (23%)
TPR repeat 586..611 CDD:276809 9/24 (38%)
TPR repeat 634..660 CDD:276809 7/36 (19%)
TPR repeat 671..699 CDD:276809 3/27 (11%)
TPR repeat 704..735 CDD:276809 7/30 (23%)
TPR repeat 740..768 CDD:276809 6/27 (22%)
TPR repeat 773..803 CDD:276809 10/47 (21%)
TPR repeat 808..836 CDD:276809 9/30 (30%)
AT5G63200NP_201125.2 PEP_TPR_lipo <137..615 CDD:274350 124/559 (22%)
TPR repeat 231..259 CDD:276809 7/43 (16%)
TPR repeat 265..293 CDD:276809 7/27 (26%)
TPR repeat 298..349 CDD:276809 9/50 (18%)
TPR repeat 354..382 CDD:276809 10/28 (36%)
Spy 402..>628 CDD:443119 59/236 (25%)
TPR repeat 483..511 CDD:276809 9/32 (28%)
TPR repeat 517..545 CDD:276809 8/27 (30%)
TPR repeat 550..582 CDD:276809 10/31 (32%)
TPR repeat 587..615 CDD:276809 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.

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