DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc1 and TOC64-V

DIOPT Version :10

Sequence 1:NP_995615.2 Gene:Tmtc1 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_196504.2 Gene:TOC64-V / 830801 AraportID:AT5G09420 Length:603 Species:Arabidopsis thaliana


Alignment Length:596 Identity:119/596 - (19%)
Similarity:189/596 - (31%) Gaps:210/596 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 LPVANFGILLWPQELSFDWGMEAVSRIRTLWDARNILTAGFYGSLVAILWKGSGLRSAASPMDFA 359
            :|.|..||      |.|......||.:..|.:::::.|.|::               |:.|....
plant   183 VPAAFCGI------LGFRPSQGTVSSVGVLPNSQSLETVGWF---------------ASDPSVLC 226

  Fly   360 EVANISLPLLRRLGGNSCHTWLGLTCDCHHQLSAPSYRSASAIY-------STSSKSKSASWTAA 417
            :|.               |..|.|:...|.       |..|.|:       |...|.||......
plant   227 QVG---------------HALLNLSAVTHR-------RQRSLIFADDLFELSDIPKQKSVQVVRK 269

  Fly   418 PILGTAFLVLPFLPASNLLFY-------VGFVMAERVLYLPSVG-YCLLFGLGFGHLWQRVNSSW 474
            .|             .||..|       ||..:|..|   ||:. :|...|       :..||: 
plant   270 AI-------------ENLSGYKTPKHVNVGQYVASNV---PSLAEFCEQSG-------KSQNSA- 310

  Fly   475 RSRLMLLCGLALLLGVHGVRTFRRNLDWRDEEQLFRSAISINPPKALGNLGSVLSAQGR------ 533
             |.|..|..:.|.:..|..:|        :.|:.:::..|...|:...::.:.|.::..      
plant   311 -STLRALSSVMLAIQRHEFKT--------NHEEWWQTCKSFLGPRFSNDVVTALKSKNESIKSLY 366

  Fly   534 --YEEAELTLRMTLGHR-----PTMADAHFNLGVVHQKQLN----FSSAIPCFRRAIELRPQLAV 587
              ..|...|::..|...     ||:||....|.....|.||    .:.|:.|            :
plant   367 RVKNEMRATIQSLLKEDGILVIPTVADPPPRLNTKRNKSLNEFLDRTYALSC------------I 419

  Fly   588 AYLNLGTSL-ISLGDHRQEAISVLRTGARLEGSGVRDRGAHVEARYTCYLQLSVLYRSDGRLQDA 651
            |.::....: |.||:|....|||                           .|...|..|..|.|.
plant   420 ASMSGCCQVTIPLGEHGDRPISV---------------------------SLLTYYGGDKFLLDT 457

  Fly   652 AAALRESLKALPLLPQKQRAVLHLRLGEILAELQDWNEAEHQQRLAMQLQPEQG-AAYVTYGQTL 715
            ...:..||       |.|     .:|...||.:.|.|    ....|.::..|:| |||       
plant   458 TLDVYASL-------QDQ-----AKLASNLAPVSDTN----GNMEASEVMKEKGNAAY------- 499

  Fly   716 ARNGSRLAEAESWFKRALQLAPLEPSSHHHYADFLEQQERHHEALGLRLRAAALAPQDYTLQSCV 780
              .|.:..:|.:::..|::   |..::..:|.:                ||||.      |:.|.
plant   500 --KGKQWNKAVNFYTEAIK---LNGANATYYCN----------------RAAAF------LELCC 537

  Fly   781 ADALRLLNRLAEAELWYRKAVTLQPMAAHAHANLGAILQMRGLRKEAVACYHKALELQPGHAISR 845
                     ..:||....||:.:......|:...|...:.....|||.|.:..||.|:|.:  ..
plant   538 ---------FQQAEQDCTKAMLIDKKNVKAYLRRGTARESLVRYKEAAADFRHALVLEPQN--KT 591

  Fly   846 ANLARMNVHKH 856
            |.:|...:.||
plant   592 AKVAEKRLRKH 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc1NP_995615.2 ArnT 11..>209 CDD:441412
TMTC_DUF1736 271..340 CDD:462468 11/44 (25%)
PilF 501..585 CDD:442297 17/100 (17%)
TPR repeat 518..546 CDD:276809 4/35 (11%)
TPR repeat 551..581 CDD:276809 8/33 (24%)
LapB 556..838 CDD:442196 57/287 (20%)
TPR repeat 586..611 CDD:276809 8/25 (32%)
TPR repeat 634..660 CDD:276809 6/25 (24%)
TPR repeat 671..699 CDD:276809 6/27 (22%)
TPR repeat 704..735 CDD:276809 7/31 (23%)
TPR repeat 740..768 CDD:276809 3/27 (11%)
TPR repeat 773..803 CDD:276809 6/29 (21%)
TPR repeat 808..836 CDD:276809 7/27 (26%)
TOC64-VNP_196504.2 Amidase 43..465 CDD:450241 75/396 (19%)
TPR repeat 488..516 CDD:276809 8/36 (22%)
TPR 495..>592 CDD:440225 29/141 (21%)
TPR repeat 521..551 CDD:276809 11/60 (18%)
TPR repeat 556..583 CDD:276809 6/26 (23%)
Blue background indicates that the domain is not in the aligned region.

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