DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc1 and TOC64-III

DIOPT Version :10

Sequence 1:NP_995615.2 Gene:Tmtc1 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_188424.2 Gene:TOC64-III / 819660 AraportID:AT3G17970 Length:589 Species:Arabidopsis thaliana


Alignment Length:217 Identity:48/217 - (22%)
Similarity:83/217 - (38%) Gaps:33/217 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EKKMFHPNVK--RYIQAIKLYNESIAFSEKGSTERALAYVNRSNICLKMQR------FEEC--LE 63
            |.|:..|.:|  |.::..||.|:.:  .:..|.|...:..:|:......:|      :.:|  |:
plant    82 ESKVMSPTIKFQRNLEKGKLCNQLV--RQSSSLESTTSCKDRTFKLYDQRRIFDAAAYGDCDELD 144

  Fly    64 NI---RLARESNYPGEKLIQREKEV-KNALAKAR-NKNASSSKASPDVVEEPELSYAAKENAPQV 123
            ::   .|........|:.  :|||. |..|.||. |.....:...|..:|..|.:    :|..:.
plant   145 DLLVYLLRTHKKLTNEEF--KEKETGKTCLLKAMLNLENGMNSTIPLFLEIAEKT----DNIKEF 203

  Fly   124 ANCLELRKNEEYGR---HV-VTTRKLKVGDVVMIERPFVTVLKDS--FRYV--RCDFCHEERPFT 180
            .|. ..|.|...|:   |: :..|.:.:.::::.....|....|.  ||..  :..|...|.|.:
plant   204 INS-AYRDNYYRGQTALHIAIERRNMDLVELLLQHGADVHARADGEFFRKAKGKAGFYFGELPLS 267

  Fly   181 LIPCEGCT-MAMYCSEECLSKA 201
            |..|...| |..|..:...|.|
plant   268 LAACTNQTAMVQYLLQNQYSPA 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc1NP_995615.2 ArnT 11..>209 CDD:441412 47/215 (22%)
TMTC_DUF1736 271..340 CDD:462468
PilF 501..585 CDD:442297
TPR repeat 518..546 CDD:276809
TPR repeat 551..581 CDD:276809
LapB 556..838 CDD:442196
TPR repeat 586..611 CDD:276809
TPR repeat 634..660 CDD:276809
TPR repeat 671..699 CDD:276809
TPR repeat 704..735 CDD:276809
TPR repeat 740..768 CDD:276809
TPR repeat 773..803 CDD:276809
TPR repeat 808..836 CDD:276809
TOC64-IIINP_188424.2 Amidase 33..451 CDD:450241 48/217 (22%)
NlpI <467..>580 CDD:443815
TPR repeat 474..502 CDD:276809
TPR repeat 507..537 CDD:276809
TPR repeat 542..569 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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