DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmtc1 and LOC572297

DIOPT Version :10

Sequence 1:NP_995615.2 Gene:Tmtc1 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_001289169.1 Gene:LOC572297 / 572297 -ID:- Length:1038 Species:Danio rerio


Alignment Length:489 Identity:103/489 - (21%)
Similarity:165/489 - (33%) Gaps:164/489 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   466 LWQRVNSSWRSRL---MLLCGLALLLGVHGVRTFRRNLDWRDEEQL-----------------FR 510
            |.|..:.:|..|.   .:||.|.                :|.|||:                 |.
Zfish    11 LQQECHFTWSLREDEDFVLCDLL----------------YRLEEQIELESDKARVTRAYSSFAFI 59

  Fly   511 SAISINPPKALGNL-GSVLSAQGRYEEAELTLRMTLGHRPTMADAHFNLGVVH------------ 562
            ..::....:||.|| .||..|:..|.:::..|.:|.|   .:|..|:::..:.            
Zfish    60 QYLNGKQQEALANLQTSVQLAKKLYRDSDEALIVTYG---DLAWLHYHMNEISACEDYLRQLDRI 121

  Fly   563 QKQ-------------------LNFS-----SAIPCFRRAIELRPQLAVAYLNLGTSLISLGDHR 603
            ||:                   |.||     :|..|||:|:|:.|  :.:.||.|.:|......:
Zfish   122 QKKFSEGSTYDMEVLREKGWAFLKFSYKYHNAAKECFRQALEINP--SDSDLNAGYALALYRTTK 184

  Fly   604 QEAISV----LRTGARLE-GSGV----------------------------RDRGAHVEARYTCY 635
            :.:.|:    |:...:|. ..||                            :....|| .||.  
Zfish   185 ETSDSLTMEQLKKAIKLNPDDGVLLVMLALRMQHNKDDVKAAQLKVIKALLKPYDPHV-IRYA-- 246

  Fly   636 LQLSVLYRSDGRLQDAAAALRESLKALPLLPQKQRAVLHLRLG------EILAELQ--------- 685
               :..||..|...||...|.|:||..|     ..|.:|..|.      :|..|..         
Zfish   247 ---AKFYRQLGEKDDAIKLLEEALKETP-----NSAFVHYELAMNYKSKKISLEKNYRTHGKAEF 303

  Fly   686 DWNEAEHQQ--------RLAMQLQPEQGAAY----VTYGQTLARNGSRLAEAESWFKRALQLAPL 738
            |..|:.||.        .:|:.|:|....|.    :.|||      |..::|::.|..|.:||..
Zfish   304 DVEESTHQYLSKIIYHLEVAVSLKPTFIIAVADLALQYGQ------SGCSKAKTLFDEAFKLANK 362

  Fly   739 EPSSHHHYADFLEQQE---RHHEALGLRLRAAALAPQDYTLQSCVADALRLLNRLAEAELWYRKA 800
            |........:|..|.:   |..|.|.:...:..|..|..:.|.      |:.....|..:.:|..
Zfish   363 EKQHLQAVYNFYGQYQLYSRRSEELAIHNFSQGLMLQPKSKQG------RMCEESLERIIKHRIN 421

  Fly   801 VTLQPMAAHAHANLGAILQMRGLRKEAVACYHKA 834
            ....|..:...|..|.|.:::|.:.:||..|.:|
Zfish   422 RVKNPNDSKVCAIQGFIHEVKGEKVKAVESYERA 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc1NP_995615.2 ArnT 11..>209 CDD:441412
TMTC_DUF1736 271..340 CDD:462468
PilF 501..585 CDD:442297 30/137 (22%)
TPR repeat 518..546 CDD:276809 10/28 (36%)
TPR repeat 551..581 CDD:276809 12/65 (18%)
LapB 556..838 CDD:442196 78/378 (21%)
TPR repeat 586..611 CDD:276809 5/28 (18%)
TPR repeat 634..660 CDD:276809 7/25 (28%)
TPR repeat 671..699 CDD:276809 10/50 (20%)
TPR repeat 704..735 CDD:276809 8/34 (24%)
TPR repeat 740..768 CDD:276809 5/30 (17%)
TPR repeat 773..803 CDD:276809 4/29 (14%)
TPR repeat 808..836 CDD:276809 8/27 (30%)
LOC572297NP_001289169.1 TPR_12 49..117 CDD:315987 14/70 (20%)
TPR repeat 51..78 CDD:276809 6/26 (23%)
TPR repeat 83..121 CDD:276809 6/40 (15%)
TPR repeat 134..163 CDD:276809 8/28 (29%)
LapB 140..374 CDD:442196 56/252 (22%)
TPR repeat 168..201 CDD:276809 6/32 (19%)
TPR repeat 206..268 CDD:276809 13/67 (19%)
TPR repeat 331..358 CDD:276809 8/32 (25%)
P-loop containing Nucleoside Triphosphate Hydrolases <537..>604 CDD:476819
FIIND 680..883 CDD:463919
DD 957..1035 CDD:472698
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.