DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc1 and ifit12

DIOPT Version :10

Sequence 1:NP_995615.2 Gene:Tmtc1 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_001177394.1 Gene:ifit12 / 567504 ZFINID:ZDB-GENE-120406-2 Length:474 Species:Danio rerio


Alignment Length:355 Identity:75/355 - (21%)
Similarity:128/355 - (36%) Gaps:96/355 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   518 PKALGNLGSVLSAQGR--YEEAELTLRMTLGHRPTMADAHFNLGVVHQKQLNFSSAIPC------ 574
            |:.||..|.......|  |::|....:..:...||.::.:....:...:..||:.. ||      
Zfish   139 PEVLGEKGWTYLKFSRKYYDKAVEVFQKAVELDPTNSEWNAGYAIALYRTENFNPP-PCTVETPA 202

  Fly   575 ---FRRAIELRPQ-------LAVAYLNLGTSLISLGDHR-QEAIS-------VLR-TGARLEGSG 620
               .|:||:|.|.       |.:..||....|::..:.. ::|::       |:| .|..|...|
Zfish   203 IKQLRQAIDLNPDDDVLRVILGIKLLNCSKGLMNESEQLVEKALNQSPEHPHVIRYVGMFLRDQG 267

  Fly   621 VRDRGAHV---------EARYTCYLQLSVLYRSDGRLQDAAAALRESLKALPLLPQKQRAVLHLR 676
            ..||...:         ::.:.|: ||::.|::               |.:.|..:|:|.|    
Zfish   268 SVDRSIEILKKALQRSPKSGFICH-QLAMCYKT---------------KKINLCKEKRRKV---- 312

  Fly   677 LGEILAELQDWNEAEHQQ----RLAMQLQPEQGAAYVTYGQTLARNGSR--LAEAESWFKRALQL 735
                     :.:||..|.    ..|..|.|...:|....|   .:.|.|  |.:||..|.:|.:|
Zfish   313 ---------EVDEARDQSIYYLEEATSLIPSFISAVCQLG---LQYGDRRDLLKAEEQFDKAFKL 365

  Fly   736 APLE----PSSHHHYADFLEQQERHHEALGLRLRAAALAPQDY----TLQSCVADALRLLNRLAE 792
            ...:    .|.|..||.|.:...|..:          ||.:.|    |:.....|..|...:|..
Zfish   366 VKEKNEHLQSVHLSYAQFQQYSNRRED----------LAIEHYEKCLTMNPHTPDGNRSAQKLCN 420

  Fly   793 AELWYRKAVTLQPMAAHAHANLGAILQMRG 822
            ..   :|.:.|.|....|:..||.:..::|
Zfish   421 IA---KKNLKLNPNDWKANEILGLVYNLKG 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc1NP_995615.2 ArnT 11..>209 CDD:441412
TMTC_DUF1736 271..340 CDD:462468
PilF 501..585 CDD:442297 18/84 (21%)
TPR repeat 518..546 CDD:276809 7/29 (24%)
TPR repeat 551..581 CDD:276809 7/38 (18%)
LapB 556..838 CDD:442196 66/315 (21%)
TPR repeat 586..611 CDD:276809 5/32 (16%)
TPR repeat 634..660 CDD:276809 4/25 (16%)
TPR repeat 671..699 CDD:276809 5/31 (16%)
TPR repeat 704..735 CDD:276809 9/32 (28%)
TPR repeat 740..768 CDD:276809 6/27 (22%)
TPR repeat 773..803 CDD:276809 6/33 (18%)
TPR repeat 808..836 CDD:276809 4/15 (27%)
ifit12NP_001177394.1 TPR 55..>248 CDD:440225 23/109 (21%)
TPR repeat 55..83 CDD:276809
TPR repeat 88..127 CDD:276809
TPR repeat 139..169 CDD:276809 7/29 (24%)
LapB 157..406 CDD:442196 60/291 (21%)
TPR repeat 174..212 CDD:276809 7/38 (18%)
TPR repeat 217..246 CDD:276809 4/28 (14%)
TPR repeat 286..331 CDD:276809 13/73 (18%)
TPR repeat 336..364 CDD:276809 9/30 (30%)
TPR repeat 374..402 CDD:276809 9/37 (24%)
Blue background indicates that the domain is not in the aligned region.

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