DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc1 and odad4

DIOPT Version :10

Sequence 1:NP_995615.2 Gene:Tmtc1 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:XP_073793700.1 Gene:odad4 / 393286 ZFINID:ZDB-GENE-040426-995 Length:526 Species:Danio rerio


Alignment Length:484 Identity:101/484 - (20%)
Similarity:161/484 - (33%) Gaps:144/484 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 YCLLFGLGFGHLWQRVNSSWR----------SRLMLLCGLALLLGVHGVRTFRRNL--------D 501
            :|:|.....|:..|..|.::|          .::.|.|.:.           |::.        .
Zfish    13 HCVLLVTLLGYTRQDCNLTYRCVLKRFDIILPKIRLKCSIT-----------RKDKARKAPSPPT 66

  Fly   502 WRDEEQLFRSAISINPPKAL------GNLGSVLSAQGRYEEAELTLRMTLGHRPTM---ADAHFN 557
            |..|....|......|.:||      ..||   .|:...::||.:|:....:...:   |:|.:.
Zfish    67 WLKETSCSREESMSKPSRALLRSRCYVKLG---DAENALKDAESSLKDNKNYFKGLYQKAEALYT 128

  Fly   558 LGVVHQKQLNFSSAIPCFRRAIELRPQLAVAYL-----------NLGT----------SLISLGD 601
            :|       :|..|:..:.|..:|||:|....|           ::||          .|::.||
Zfish   129 MG-------DFEFALVYYHRGHKLRPELQEFRLGIQKAQEAIDNSVGTICLPKGPSSVKLVNKGD 186

  Fly   602 HRQEAISVLRTGA---RLEGSGVRDRGAHV----EARYTCYLQLSVLYRSDGRLQDAAAALRESL 659
                 :|....|.   .|..|..::...|.    :...|....|..|| ||          ||.|
Zfish   187 -----LSFFHNGVHPQNLNPSNKKESKKHSKKTDKGEKTAKQLLGELY-SD----------REYL 235

  Fly   660 KALPLLPQKQRAVLHLRLGEILAELQDWNEAEHQQRLAMQLQPEQGAAYVTYGQTLARNGSRLAE 724
            |  .||..:......:|.||.:.:|...:.:....|:|...|  |...|       ||...|...
Zfish   236 K--KLLQDEDLVKCKIRSGERVQDLIVGSISYLDTRMAFWQQ--QKPIY-------ARQRDRKLM 289

  Fly   725 AESWFKRALQLAPLEPSSHHHYADFLEQQERHHEAL-------GL-RLRAAALAPQDYT------ 775
            .:.|.| .|...|.:|:.:     .|...|....||       || :.|......:|::      
Zfish   290 QQQWSK-VLHKPPSDPTRY-----VLSSLEEIDTALSAGYTESGLNKARELMKVVKDWSEDALPN 348

  Fly   776 -------LQSCVADALRLLNRL------AEAELWYRKAVTLQPMAAHAHANLGAILQMRGLRKEA 827
                   |.|.:.:||..|..:      .|.:|...|...|....:.|..|:|.:....|..::|
Zfish   349 KNEVLGNLHSYIGNALMDLGNMDRALHHHEKDLELAKKCDLTDSKSRALDNIGRVYARIGKFQQA 413

  Fly   828 VACYHKALELQPG--------HAISRANL 848
            :..:.|.|.|..|        |.|.|..|
Zfish   414 IEVWEKKLPLACGGLEKAWLFHEIGRCYL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc1NP_995615.2 ArnT 11..>209 CDD:441412
TMTC_DUF1736 271..340 CDD:462468
PilF 501..585 CDD:442297 21/92 (23%)
TPR repeat 518..546 CDD:276809 8/33 (24%)
TPR repeat 551..581 CDD:276809 6/32 (19%)
LapB 556..838 CDD:442196 72/336 (21%)
TPR repeat 586..611 CDD:276809 7/45 (16%)
TPR repeat 634..660 CDD:276809 7/25 (28%)
TPR repeat 671..699 CDD:276809 6/27 (22%)
TPR repeat 704..735 CDD:276809 8/30 (27%)
TPR repeat 740..768 CDD:276809 8/35 (23%)
TPR repeat 773..803 CDD:276809 9/48 (19%)
TPR repeat 808..836 CDD:276809 6/27 (22%)
odad4XP_073793700.1 None
Blue background indicates that the domain is not in the aligned region.

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