DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc1 and BBS8

DIOPT Version :10

Sequence 1:NP_995615.2 Gene:Tmtc1 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_608524.1 Gene:BBS8 / 33217 FlyBaseID:FBgn0031255 Length:549 Species:Drosophila melanogaster


Alignment Length:480 Identity:99/480 - (20%)
Similarity:155/480 - (32%) Gaps:104/480 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 WGMEAVSRIRTLWDAR-NILTAGFYGSLVAILWKGSGLRSAASPMDFAEVANISLP--------- 367
            |.||.|      |..: ..||...|   |..|.:..|...|...::|..:|..:.|         
  Fly   101 WLMEGV------WQLKMRALTQRVY---VDDLDEDDGGNEATEEVEFERIATAARPGSSIKTAFQ 156

  Fly   368 ----------LLRRLGGNSCHTWLGLTCDCHHQLSAPSYRSASAIYSTSSKSKSASWTAAPILGT 422
                      ..|..|....|:..| ..:.....||...|..:::....|...|...||:.|..|
  Fly   157 PRPLTSQRAQQARSRGAGVAHSSDG-RLNSSRPGSAAVARPGTSLSRPGSSLGSRCGTASRIRAT 220

  Fly   423 AFLVLPFLPASNLLFYVG----FVMAERVLYLPSVGYCLLFGLGFGH---------LWQRV---- 470
            :........|::.|:...    .:.|||...:.:     ||...:.|         |.|.|    
  Fly   221 SAAAFNVGDATSKLYQASRLNPTIYAERETLVKA-----LFQFLYYHEADVQKAHSLCQAVLEVE 280

  Fly   471 -----------NSSWRSRLMLLCGLALLLGVHGVRTFRRNLDWRDEEQLFRSAISINPPKALGNL 524
                       .|.|..:.|..|    ||.:|..|        |.|..|.:|..|...|.....|
  Fly   281 RQKPSGSTGCTLSWWWQQQMGRC----LLALHYPR--------RAEPFLQQSLTSFPHPDTYLLL 333

  Fly   525 GSVLSAQGRYEEAELTLRMTLGHRPTMADAHFNLGVVHQKQLNFSSAIPCFRRAIELRP------ 583
            ..|.....:.|.|.|.:...:..||...........:||.......|:..:|.|.:|.|      
  Fly   334 SRVYQRIKQPERALLVIGEVVDSRPFDVTYRLEQARIHQAMEQQEDALQLYRLAAKLHPINVESL 398

  Fly   584 -QLAVAYLNLGTSLISLGDHRQEAISVLRTGARLEGSGVRDRGAHVEARYTCYLQLSVLYRSDGR 647
             .:||.|.......::|..:|:    :|..||:             .....|.:.|..||  .|:
  Fly   399 ASIAVGYFYDNNPEMALMYYRR----ILSLGAQ-------------SPELYCNIALCCLY--GGQ 444

  Fly   648 LQDAAAALRESLKALPLLPQKQRAVLHLRLGEILAELQDWNEAEHQQRLAMQLQPEQGAAYVTYG 712
            :.......:.:| |....| .|::.:...|..:.....|:|.|:...:|.:....:.|||.....
  Fly   445 IDLVLPCFQRAL-ATATQP-GQKSDIWYNLSFVAVTSGDFNLAKRCLQLCLTSDAQNGAALNNLA 507

  Fly   713 QTLARNGSRLAEAESWFKRALQLAP 737
            ...|::|..|. |:|:...|..:.|
  Fly   508 VLAAQSGDILG-AKSYLNAAKDVMP 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc1NP_995615.2 ArnT 11..>209 CDD:441412
TMTC_DUF1736 271..340 CDD:462468 8/27 (30%)
PilF 501..585 CDD:442297 20/90 (22%)
TPR repeat 518..546 CDD:276809 6/27 (22%)
TPR repeat 551..581 CDD:276809 5/29 (17%)
LapB 556..838 CDD:442196 39/189 (21%)
TPR repeat 586..611 CDD:276809 5/24 (21%)
TPR repeat 634..660 CDD:276809 5/25 (20%)
TPR repeat 671..699 CDD:276809 5/27 (19%)
TPR repeat 704..735 CDD:276809 9/30 (30%)
TPR repeat 740..768 CDD:276809
TPR repeat 773..803 CDD:276809
TPR repeat 808..836 CDD:276809
BBS8NP_608524.1 TTC8_N 96..215 CDD:411061 25/123 (20%)
LapB 299..536 CDD:442196 58/267 (22%)
TPR repeat 299..322 CDD:276809 10/34 (29%)
TPR repeat 327..355 CDD:276809 6/27 (22%)
TPR repeat 365..389 CDD:276809 5/23 (22%)
TPR repeat 394..424 CDD:276809 6/33 (18%)
TPR repeat 429..457 CDD:276809 6/30 (20%)
TPR repeat 466..493 CDD:276809 5/26 (19%)
TPR repeat 500..526 CDD:276809 8/26 (31%)
Blue background indicates that the domain is not in the aligned region.

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