DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31690 and Lonrf3

DIOPT Version :9

Sequence 1:NP_995615.2 Gene:CG31690 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:XP_006257509.1 Gene:Lonrf3 / 298322 RGDID:1565451 Length:809 Species:Rattus norvegicus


Alignment Length:237 Identity:53/237 - (22%)
Similarity:82/237 - (34%) Gaps:73/237 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   623 DRGAHVEARYT-CYLQLSVLYRSDGRLQDAAAALRESLKALPLLPQKQ--RAVLHLRLGEILAEL 684
            :||...:.|.. |.::||.|..:.||.:.               |::.  :|.|.||:..:|:.|
  Rat   188 ERGRAADRRCALCGVKLSALMVASGRARG---------------PRRSGPQAPLQLRVNVVLSGL 237

  Fly   685 QDWNEAEHQQRLAMQLQPEQGAAYVTYGQTLARNGSRLAEAESWFKRALQLAPLEPSSHHHYADF 749
            ..            :|.|....|     ..|...|:||                           
  Rat   238 LG------------KLFPGPARA-----SQLRHEGNRL--------------------------- 258

  Fly   750 LEQQERHHEALGLRL-RAAALAPQDYTLQSCVADALRLL----NRLAEAELWYRKAVTLQPMAAH 809
              .:||..||..|:. .|..|||.|:.|.|..:.....|    :.|.:||:    |..|:||...
  Rat   259 --YRERQVEAALLKYNEAVRLAPNDHLLYSNRSQIYFTLESHEDALHDAEI----ACKLRPMGFK 317

  Fly   810 AHANLGAILQMRGLRKEAVACYHKALELQPGHAISRANLARM 851
            ||......|...|..|||:..:...:.|...:..:|:...|:
  Rat   318 AHFRKAQALATLGKVKEALREFLYCVSLDGKNKRARSEAQRL 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31690NP_995615.2 DUF1736 272..340 CDD:285594
TPR_11 518..583 CDD:290150
TPR repeat 518..546 CDD:276809
TPR repeat 551..581 CDD:276809
TPR_1 552..584 CDD:278916
TPR 565..841 CDD:223533 51/225 (23%)
TPR repeat 586..611 CDD:276809
TPR repeat 634..660 CDD:276809 6/25 (24%)
TPR repeat 671..699 CDD:276809 6/27 (22%)
TPR repeat 704..735 CDD:276809 5/30 (17%)
TPR repeat 740..768 CDD:276809 6/28 (21%)
TPR repeat 773..803 CDD:276809 8/33 (24%)
TPR 808..841 CDD:197478 8/32 (25%)
TPR repeat 808..836 CDD:276809 7/27 (26%)
Lonrf3XP_006257509.1 RING 163..200 CDD:302633 3/11 (27%)
TPR_11 247..313 CDD:290150 23/103 (22%)
TPR repeat 248..276 CDD:276809 11/61 (18%)
TPR repeat 281..311 CDD:276809 8/33 (24%)
TPR repeat 316..339 CDD:276809 7/22 (32%)
RING 516..555 CDD:238093
LON_substr_bdg 605..806 CDD:280370
LON 616..802 CDD:271862
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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