DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc1 and Spag1

DIOPT Version :10

Sequence 1:NP_995615.2 Gene:Tmtc1 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_001346910.1 Gene:Spag1 / 26942 MGIID:1349387 Length:913 Species:Mus musculus


Alignment Length:372 Identity:80/372 - (21%)
Similarity:124/372 - (33%) Gaps:110/372 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   504 DEEQLFRSAISINPPKALGNLGSVLSAQGRYEEAELTLRMTLGHRPTMADAHFNLGVVHQKQLNF 568
            ::|:.|.:    |..|..||....   .|.||||.:....:|...|| |.|:.|......|...:
Mouse   218 EKEKSFLA----NREKGKGNEAFY---SGDYEEAVMYYTRSLSALPT-AIAYNNRAQAEIKLQRW 274

  Fly   569 SSAIPCFRRAIELRPQLAVAYLNLGTSLISLGDHRQEAISVLRTGARLEGSGVRDRGAHVEARYT 633
            |||:....:|:||.|....|.|...|:                                      
Mouse   275 SSALEDCEKALELDPGNVKALLRRATT-------------------------------------- 301

  Fly   634 CYLQLSVLYRSDGRLQDAAAALRESLKALP-------LLPQKQRAVLHLRLGEILAELQD----- 686
                    |:...:||:|...||:.|:..|       .|.:.:|   .|:..|.::|||.     
Mouse   302 --------YKHQNKLQEAVDDLRKVLQVEPDNDLAKKTLSEVER---DLKNSEPVSELQTKGKRM 355

  Fly   687 -----WNEAEHQQRLAMQLQPEQGAAYVTYGQTLARNGSRLAEAESWFKRALQLAPLEPSSHHHY 746
                 .|..:...:.:...:.:.|:.....|....:...|.:|.....:|.....|.        
Mouse   356 VIEEVENSGDEGGKGSADEREDGGSDEAAMGNIQKKLMVRRSEGGRRSRRGRTPGPR-------- 412

  Fly   747 ADFLEQQERHHEALGLRLRA-AALAPQDYTLQSCVADALRLLNR----------LAEAELWYRKA 800
               .|||.      |||..| |:.....|..:...||....|.|          .|||...|..|
Mouse   413 ---AEQQG------GLRETATASTGDSHYPEEPRAADNPSGLKRRGNELFRGGQFAEAAAQYSVA 468

  Fly   801 VT-LQPM-AAHA------HANLGAILQMRGLRKEAVACYHKALELQP 839
            :. |:|. :|:|      ::|..|.....|..::.:...::||||.|
Mouse   469 IAQLEPTGSANADELSILYSNRAACYLKEGNCRDCIQDCNRALELHP 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc1NP_995615.2 ArnT 11..>209 CDD:441412
TMTC_DUF1736 271..340 CDD:462468
PilF 501..585 CDD:442297 25/80 (31%)
TPR repeat 518..546 CDD:276809 8/27 (30%)
TPR repeat 551..581 CDD:276809 8/29 (28%)
LapB 556..838 CDD:442196 62/317 (20%)
TPR repeat 586..611 CDD:276809 3/24 (13%)
TPR repeat 634..660 CDD:276809 6/25 (24%)
TPR repeat 671..699 CDD:276809 6/37 (16%)
TPR repeat 704..735 CDD:276809 5/30 (17%)
TPR repeat 740..768 CDD:276809 7/28 (25%)
TPR repeat 773..803 CDD:276809 10/40 (25%)
TPR repeat 808..836 CDD:276809 6/33 (18%)
Spag1NP_001346910.1 3a0801s09 214..698 CDD:273380 80/372 (22%)
TPR repeat 229..253 CDD:276809 8/26 (31%)
TPR 230..>343 CDD:440225 35/165 (21%)
TPR repeat 258..287 CDD:276809 8/28 (29%)
TPR repeat 292..320 CDD:276809 9/73 (12%)
TPR repeat 445..471 CDD:276809 7/25 (28%)
TPR repeat 483..513 CDD:276809 5/29 (17%)
TPR repeat 518..546 CDD:276809
TPR repeat 619..646 CDD:276809
PLN03088 631..>807 CDD:215568
TPR repeat 651..681 CDD:276809
RPAP3_C 790..881 CDD:464012
Blue background indicates that the domain is not in the aligned region.

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