DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc1 and Ifit1

DIOPT Version :10

Sequence 1:NP_995615.2 Gene:Tmtc1 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_032357.2 Gene:Ifit1 / 15957 MGIID:99450 Length:463 Species:Mus musculus


Alignment Length:446 Identity:94/446 - (21%)
Similarity:167/446 - (37%) Gaps:138/446 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   488 LGVHGVRTFRRNLDWRDEEQLFRSAISINPPKALGNLGSVLSAQGRYEEAELTLR--MTLG---- 546
            ||:|.:..:.|:|..:.:|.                |.|:..|:...:..:|:.|  .|.|    
Mouse    52 LGMHNLLAYVRHLKGQQDEA----------------LQSLKEAEALIQSEQLSKRSLATWGNCAW 100

  Fly   547 ---HRPTMADAHFNLGVVHQKQLNFSS-----------------------------AIPCFRRAI 579
               ||.::|:|...|..|.:....|||                             |:.||.:|:
Mouse   101 LHYHRGSLAEAQIYLDKVEKVCKEFSSPFRYRLECAEMDCEEGWALLKCGGGNYKQAMACFAKAL 165

  Fly   580 ELRPQLAVAYLNLGTSLISLGDHRQE------AISVLRTGARLEGSG----------VRDRGAHV 628
            ::.|:  ....|.|.::::   :||:      ::..||...||....          ::|.|.||
Mouse   166 KVEPE--NPEYNTGYAVVA---YRQDLDDNFISLEPLRKAVRLNPEDPYLKVLLALKLQDLGEHV 225

  Fly   629 EA------------------RYTCYLQLSVLYRSDGRLQDAAAALRESLKALPLLPQKQRAVLHL 675
            ||                  ||.     :..:|...|:..|...|..:|:|.|     ....||.
Mouse   226 EAEAHIEEALSSTSCQSYVIRYA-----AKYFRRKHRVDKALHLLNRALQASP-----SSGYLHY 280

  Fly   676 RLG----EILAEL----------QD-----WNEAEHQQRLAMQLQPEQGAAYVTYGQTLARNGSR 721
            :.|    :.:::|          ||     ..:|.|:.:..::|:|....|||...:..|.. .:
Mouse   281 QKGLCYKQQISQLRTSRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEI-HQ 344

  Fly   722 LAEAESWFKRALQ----LAPLEPSSHHHYADFLE-QQERHHEALGLRLRAAALAPQDYTLQSCVA 781
            ..|||..|::||.    :|.:|...|..|..||: .::...:|:.|.|:...:..:.:..:.   
Mouse   345 YEEAERNFQKALNNKTLVAHIEQDIHLRYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWRK--- 406

  Fly   782 DALRLLNRLAEAELWYRKAVTLQPMAAHAHANLGAILQMRGLRKEAVACYHKALEL 837
             .|..|.::||      :.|........:.:.||.:.:::|..|.|:..|.|||.|
Mouse   407 -LLTALEKVAE------RRVCQNVHLVESTSLLGLVYKLKGQEKNALFYYEKALRL 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc1NP_995615.2 ArnT 11..>209 CDD:441412
TMTC_DUF1736 271..340 CDD:462468
PilF 501..585 CDD:442297 22/121 (18%)
TPR repeat 518..546 CDD:276809 6/29 (21%)
TPR repeat 551..581 CDD:276809 11/58 (19%)
LapB 556..838 CDD:442196 77/369 (21%)
TPR repeat 586..611 CDD:276809 4/30 (13%)
TPR repeat 634..660 CDD:276809 4/25 (16%)
TPR repeat 671..699 CDD:276809 8/46 (17%)
TPR repeat 704..735 CDD:276809 10/34 (29%)
TPR repeat 740..768 CDD:276809 7/28 (25%)
TPR repeat 773..803 CDD:276809 5/29 (17%)
TPR repeat 808..836 CDD:276809 8/27 (30%)
Ifit1NP_032357.2 TPR 1. /evidence=ECO:0000255 52..85 9/48 (19%)
TPR repeat 55..86 CDD:276809 7/46 (15%)
BepA 58..207 CDD:443813 32/169 (19%)
TPR repeat 91..121 CDD:276809 8/29 (28%)
TPR 2. /evidence=ECO:0000255 92..125 8/32 (25%)
TPR repeat 136..166 CDD:276809 4/29 (14%)
TPR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 138..171 5/34 (15%)
LapB 152..396 CDD:442196 57/259 (22%)
TPR repeat 171..203 CDD:276809 6/34 (18%)
TPR 4. /evidence=ECO:0000255 174..207 8/35 (23%)
TPR repeat 208..236 CDD:276809 6/27 (22%)
TPR 5. /evidence=ECO:0000255 209..241 6/31 (19%)
TPR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 242..275 9/42 (21%)
TPR repeat 242..270 CDD:276809 6/32 (19%)
TPR repeat 275..324 CDD:276809 8/48 (17%)
TPR 7. /evidence=ECO:0000255 294..328 6/33 (18%)
TPR 8. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 329..362 10/33 (30%)
TPR repeat 329..356 CDD:276809 8/27 (30%)
TPR 9. /evidence=ECO:0000255 367..401 7/33 (21%)
TPR 10. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 426..459 10/30 (33%)
Blue background indicates that the domain is not in the aligned region.

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