DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc1 and BBS4

DIOPT Version :10

Sequence 1:NP_995615.2 Gene:Tmtc1 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:XP_061496822.1 Gene:BBS4 / 1275136 VectorBaseID:AGAMI1_009336 Length:499 Species:Anopheles gambiae


Alignment Length:381 Identity:71/381 - (18%)
Similarity:136/381 - (35%) Gaps:84/381 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   494 RTFRRNLDWRDEEQLFRSAISINPPKALGN-----LGSVLSAQGRYEEAELTLRMTLGHRPTMAD 553
            |...|.:.....:||  |:.:...|:::.|     |...|..:..:|:.:..:...||.......
Mosquito    11 RAHERTVSVSTNKQL--SSQAAMKPQSVTNRHMNWLIHGLYTRKHFEQCKKLIDRQLGICYDKQY 73

  Fly   554 AHFNLGVVHQKQLNFSSAIPCFRRAIELRPQLAVAYLNLGTSLISLGDHRQEAISVLRTGARLE- 617
            .::..|::.:::.|.:.|:.||::||.|..:....|..|..:|.|:|..|......|:....|| 
Mosquito    74 LYYMKGLILREENNSTEAVHCFQQAIALNKKEPENYKELAKTLYSMGKFRNALEVFLKAETLLER 138

  Fly   618 --------------------GSGVRDRGAHVEARYTC------YLQLSVLYRSDGRLQDAAAALR 656
                                .:||.:...:::...||      |..|:.:|..:|          
Mosquito   139 PDHEIYHHIGELYYKNFGQPKAGVVEAKEYLKQVVTCGKHVESYKILAEIYIEEG---------- 193

  Fly   657 ESLKALPLLP------------QKQRAVLHLR---------------------------LGEILA 682
            :|:||:.::.            ..|..:|:|:                           ||.||.
Mosquito   194 DSIKAIEMIENCLQITQDDVSLMTQIGILYLKINEYQRAFEKLLDATATDSKHTSALLALGSILQ 258

  Fly   683 ELQDWNEAEHQQRLAMQLQPEQGAAYVTYGQTLARNGSRLAEAESWFKRALQLAPLEPSSHHHYA 747
            ...|.:.|.::.:....|..|....:...|....:....:| |.|..::|..::||..::.::..
Mosquito   259 SKNDIDGALNKYKRISNLTDESSEVWSNIGLCFFKKQKFIA-AISCLRKAAWVSPLNFNALYNLG 322

  Fly   748 DFLEQQERHHEALGLRLRAAALAPQDYTLQSCVADALRLLNRLAEAELWYRKAVTL 803
            ..|...:::..|......|.:|.|:.......:...||.||....|.|...|:..|
Mosquito   323 LVLVTAQQYVSAFQTLAAAISLRPEHAECYMLLGTCLRHLNDPGNAYLSLEKSTML 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc1NP_995615.2 ArnT 11..>209 CDD:441412
TMTC_DUF1736 271..340 CDD:462468
PilF 501..585 CDD:442297 18/88 (20%)
TPR repeat 518..546 CDD:276809 5/32 (16%)
TPR repeat 551..581 CDD:276809 7/29 (24%)
LapB 556..838 CDD:442196 59/314 (19%)
TPR repeat 586..611 CDD:276809 6/24 (25%)
TPR repeat 634..660 CDD:276809 6/31 (19%)
TPR repeat 671..699 CDD:276809 8/54 (15%)
TPR repeat 704..735 CDD:276809 5/30 (17%)
TPR repeat 740..768 CDD:276809 3/27 (11%)
TPR repeat 773..803 CDD:276809 7/29 (24%)
TPR repeat 808..836 CDD:276809
BBS4XP_061496822.1 None
Blue background indicates that the domain is not in the aligned region.

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