DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31690 and tmtc4

DIOPT Version :9

Sequence 1:NP_995615.2 Gene:CG31690 / 33455 FlyBaseID:FBgn0051690 Length:859 Species:Drosophila melanogaster
Sequence 2:NP_001121486.1 Gene:tmtc4 / 100158586 XenbaseID:XB-GENE-5771787 Length:738 Species:Xenopus tropicalis


Alignment Length:794 Identity:238/794 - (29%)
Similarity:360/794 - (45%) Gaps:163/794 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AGC--SALAFVLYLNTLNAGFVYDDRRAILANGDVTGARPLANLLRNDFWGTPLVDSGSHGSWRP 86
            |.|  ..||||.:.|:.|..||:||..||:.|.|:.|..|:|:|..:|||||.|..:.||.|:||
 Frog    21 AKCLVGTLAFVCFANSYNGRFVFDDSEAIINNKDLRGETPVADLWLHDFWGTKLSSNASHKSYRP 85

  Fly    87 LCVLSFRLNY-LAGGMTPLGYHLVNVMLHCVATWLVFLVARTLLP----SRMG---------VLA 137
            |.||:||:|| :|||:.|:|:|.||::|||:.:.|:..|...|..    |..|         .|.
 Frog    86 LTVLTFRMNYHIAGGLHPVGFHFVNIVLHCLVSVLMLNVFSMLFGGMTCSHKGKQITYAPKASLL 150

  Fly   138 AGALFAVHPAHTEAVAGLVGRADLASCVCYLLAYLSYRRHMLNRE-------WGSLILTIMLALA 195
            |..||||||.|||.|||:||||||...:|.:|::|.|.|.:....       |  ::.:|:||..
 Frog   151 AALLFAVHPVHTECVAGIVGRADLLCALCVVLSFLGYCRALPGNNTTHSSVFW--VMFSILLAAV 213

  Fly   196 ALLCKETAITAL---------LLCGLCDVLSPVGRE-NSDKVCDGSISGLASFNFQRR--FRSLS 248
            |:||||..||.|         ::|.| ::|..|.:. ..||..:.:       .|.|:  |..:|
 Frog   214 AMLCKEQGITVLGLNAVFDVFVICKL-NILECVQKVLRRDKTSENN-------KFDRKGLFVRIS 270

  Fly   249 ILGFTLLCGLYCRLSLLPRPSTAFSAADNPTAHESCFWTRTLTFLYLPVANFGILLWPQELSFDW 313
            :|....:|.||.|..::.....||:..|||.:.......|.:.:.|....|..:||.|..|.|||
 Frog   271 LLVSGGICMLYIRWRIMGTGPPAFTEVDNPASFADSLLVRVINYNYYYSLNGWLLLCPWWLCFDW 335

  Fly   314 GMEAVSRIRTLWDARNILTAGFYGSLVAILWKGSGLRSAASPMDFAEVANISLPLLRRLGGNSCH 378
            .|..:..|.:|.|.|.|.....:..|:.::::                                 
 Frog   336 SMGCIPLINSLSDWRVIALVALWFCLLGLMYQ--------------------------------- 367

  Fly   379 TWLGLTCDCHHQLSAPSYRSASAIYSTSSKSKSASWTAAPILGTAFLVLPFLPASNLLFYVGFVM 443
                                  |::|.:::.:...     .||..||::||||||||.|.||||:
 Frog   368 ----------------------ALFSNNAQKRRML-----TLGLGFLIIPFLPASNLFFRVGFVV 405

  Fly   444 AERVLYLPSVGYCLLFGLGFGHLWQRVNSSWRSRLMLLCGLALLLGVHGVRTFRRNLDWRDEEQL 508
            |||||||||||||:||..|:..:.:.:    :::.:|...:..::.::.||...|:..|:.||.|
 Frog   406 AERVLYLPSVGYCVLFTYGYSKICRLI----KNKKLLSAAILGIMVMNVVRCIYRSNQWKSEELL 466

  Fly   509 FRSAISINP---------------------------------PK---ALGNLGSVLSAQGRYEEA 537
            ||||||:.|                                 ||   |:.|||::|..:.:.:||
 Frog   467 FRSAISVCPLNAKVHYNVGKNLADRGYQTEAIEFYRESVRLNPKYVHAMNNLGNILKEKDQLQEA 531

  Fly   538 ELTLRMTLGHRPTMADAHFNLGVVHQKQLNFSSAIPCFRRAIELRPQLAVAYLNLGTSLISLGDH 602
            :..|...:..:|..|.|..|||:|......|..|...:..||:.|.:....|.|||.....|..|
 Frog   532 QQLLSRAVSIQPDFAAAWMNLGIVQNSLKYFEEAEKSYLTAIKYRKKYPDCYYNLGRLYADLNRH 596

  Fly   603 RQEAISVLRTGARLEGSGVRDRGAHVEARYTCYLQLSVLYRSDGRLQDAAAALRESLKALPLLPQ 667
             .:|::..|....|       :..|..|    :..:.:|..:.|.|..|.|..||:||.||    
 Frog   597 -VDALNAWRNATFL-------KPEHSLA----WNNMIILMDNTGNLAKAEAIGREALKLLP---- 645

  Fly   668 KQRAVLHLRLGEILAELQDWNEAEHQQRLAMQLQPEQGAAYVTYGQTLARNGSRLAEAESWFKRA 732
             ....:...|..:|.:.|.:.|:|.....|::..| ..|:|......|......|..|:..::.:
 Frog   646 -NDHSITFSLANVLGKAQKYKESESLFLKAIEANP-SSASYHNNLAVLYHRWGNLDLAKKHYEIS 708

  Fly   733 LQLAPLEPSSHHHY 746
            ::|.|..|.:..:|
 Frog   709 MKLDPSAPGTKENY 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31690NP_995615.2 DUF1736 272..340 CDD:285594 20/67 (30%)
TPR_11 518..583 CDD:290150 21/67 (31%)
TPR repeat 518..546 CDD:276809 10/30 (33%)
TPR repeat 551..581 CDD:276809 10/29 (34%)
TPR_1 552..584 CDD:278916 11/31 (35%)
TPR 565..841 CDD:223533 43/182 (24%)
TPR repeat 586..611 CDD:276809 7/24 (29%)
TPR repeat 634..660 CDD:276809 7/25 (28%)
TPR repeat 671..699 CDD:276809 6/27 (22%)
TPR repeat 704..735 CDD:276809 5/30 (17%)
TPR repeat 740..768 CDD:276809 2/7 (29%)
TPR repeat 773..803 CDD:276809
TPR 808..841 CDD:197478
TPR repeat 808..836 CDD:276809
tmtc4NP_001121486.1 DUF1736 288..362 CDD:369859 21/73 (29%)
TPR 423..708 CDD:223533 72/306 (24%)
TPR repeat 478..506 CDD:276809 0/27 (0%)
TPR repeat 514..540 CDD:276809 8/25 (32%)
TPR repeat 545..575 CDD:276809 10/29 (34%)
TPR repeat 580..606 CDD:276809 8/26 (31%)
TPR repeat 614..642 CDD:276809 8/31 (26%)
TPR repeat 647..677 CDD:276809 6/29 (21%)
TPR repeat 682..710 CDD:276809 5/27 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I7022
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1320023at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.