Protein Alignment Trf5 and tbp1

DIOPT Version :9

• Sequence 1: NP_608700.2
• Gene: Trf5 / 33454
• FlyBaseID: FBgn0031446
• Length: 305
• Species: Drosophila melanogaster
• Sequence 2: NP_594566.1
• Gene: tbp1 / 2541582
• PomBaseID: SPAC29E6.08
• Length: 231
• Species: Schizosaccharomyces pombe
• Alignment Length: 257
• Identity: 47/257 - (18%)
• Similarity: 100/257 - (38%)
• Gaps: 37/257 - (14%)

  Fly    11 SMPMEALIKTKVMKTASMSRKTLLEDAKLSTSD-QDPSDRQVLANKASEGAEEMSLPIVNPREPT 74
            ::|..|...:..|..:|::...|......:|:: .|..|.:|..|:...|       ||    ||
pombe     4 ALPTTASQASAFMNNSSLTFPVLPNANNEATNETADSGDAEVSKNEGVSG-------IV----PT 57

  Fly    75 LKDVLSIYENVSKLGDIQRYLNVIYKPFYCLAMTTSKFHLLELDMGLKNTAFEPEKHMALFVYRY 139
            |:::::.             :|:..:    |.:.|...|       .:|..:.|::..|:.:...
pombe    58 LQNIVAT-------------VNLDCR----LDLKTIALH-------ARNAEYNPKRFAAVIMRIR 98

  Fly   140 SPTRSIRIYPHGN-IYCQAFCKNSARYGLANILKELRYLGYAPRLRRLKTNAVNATFSVPFNLNL 203
            .|..:..|:..|. :......::.::.......:.::.||:..:....|...:..:..|.|.:.|
pombe    99 EPKSTALIFASGKMVVLGGKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRL 163

  Fly   204 RQFHLENPVVTRYDTSKYPFLVYKMMGTTVEIAIFPTGYVIVLFATTMEITKLAIAHILPTL 265
            ......:...:.|:...:|.|:|:|:...|.:.||.:|.:::..|...|....|...|.|.|
pombe   164 EGLAYSHGTFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVL 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trf5	NP_608700.2	PLN00062	110..265	CDD:177693	27/155 (17%)
		TBP	191..267	CDD:278767	18/75 (24%)
tbp1	NP_594566.1	PLN00062	55..230	CDD:177693	35/199 (18%)
		TBP_eukaryotes	55..228	CDD:239952	35/199 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2101
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10126
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	3	2.960