Protein Alignment Trf5 and tbp-1

DIOPT Version :9

• Sequence 1: NP_608700.2
• Gene: Trf5 / 33454
• FlyBaseID: FBgn0031446
• Length: 305
• Species: Drosophila melanogaster
• Sequence 2: NP_001370645.1
• Gene: tbp-1 / 176054
• WormBaseID: WBGene00006542
• Length: 340
• Species: Caenorhabditis elegans
• Alignment Length: 234
• Identity: 43/234 - (18%)
• Similarity: 90/234 - (38%)
• Gaps: 41/234 - (17%)

  Fly    48 DRQVLANKA-----------SEGAEEMSLPIVNPREPTLKDVLSIYENVSKLGDIQRYLNVIYKP 101
            ||..|.::|           :..|.::.:|:     |.|::::|    ...||
 Worm   135 DRDALTHQAPASNIAATMVPATPASQLDIPM-----PALQNIVS----TVNLG------------ 178

  Fly   102 FYCLAMTTSKFHLLELDMGLKNTAFEPEKHMALFVYRYSPTRSIRIYPHGNIYCQ-AFCKNSARY 165
                    .:..|.::.:..:|..:.|::..|:.:....|..:..|:..|.:.|. |..:.::|.
 Worm   179 --------VQLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEASRL 235

  Fly   166 GLANILKELRYLGYAPRLRRLKTNAVNATFSVPFNLNLRQFHLENPVVTRYDTSKYPFLVYKMMG 230
            ......:.::.||:..:........:..:..|.|.:.|....:.:...:.|:...:|.|:|:|:.
 Worm   236 AARKYARIVQKLGFQAKFTEFMVQNMVGSCDVRFPIQLEGLCITHSQFSTYEPELFPGLIYRMVK 300

  Fly   231 TTVEIAIFPTGYVIVLFATTMEITKLAIAHILPTLYRLK 269
            ..|.:.||.:|.|::..|.|......|...|.|.|...|
 Worm   301 PRVVLLIFVSGKVVITGAKTKRDIDEAFGQIYPILKGFK 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trf5	NP_608700.2	PLN00062	110..265	CDD:177693	30/155 (19%)
		TBP	191..267	CDD:278767	19/75 (25%)
tbp-1	NP_001370645.1	TBP_eukaryotes	165..338	CDD:239952	36/201 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2101
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10126
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910