DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf5 and Tbp

DIOPT Version :10

Sequence 1:NP_608700.2 Gene:Trf5 / 33454 FlyBaseID:FBgn0031446 Length:305 Species:Drosophila melanogaster
Sequence 2:XP_309748.3 Gene:Tbp / 1271006 VectorBaseID:AGAMI1_005349 Length:446 Species:Anopheles gambiae


Alignment Length:258 Identity:49/258 - (18%)
Similarity:103/258 - (39%) Gaps:28/258 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PMEALIKTKVMKTASMSRKTLLEDAKLSTSDQDPSDRQVLANKASEGAEEMSLPIVNPREPTLKD 77
            ||..:.::|...|.|..:      :....|.:||.:...:....:.|......| :.|.||.:  
Mosquito   214 PMVPMTESKAAATPSHPQ------SGSGGSVRDPENIGSVNIHQTMGPATPMTP-MTPSEPAI-- 269

  Fly    78 VLSIYENVSKLGDIQRYLNVIYKPFYCLAMTTSKFHLLELDMGLKNTAFEPEKHMALFVYRYSPT 142
                   :.:|.:|...:|:           :.|..|.::.:..:|..:.|::..|:.:....|.
Mosquito   270 -------LPQLQNIVSTVNL-----------SCKLDLKKIALHARNAEYNPKRFAAVIMRIREPR 316

  Fly   143 RSIRIYPHGNIYCQ-AFCKNSARYGLANILKELRYLGYAPRLRRLKTNAVNATFSVPFNLNLRQF 206
            .:..|:..|.:.|. |..::.:|.......:.::.||:..:....|...:..:..|.|.:.|...
Mosquito   317 TTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFTAKFLDFKVQNMVGSCDVRFPIRLEGL 381

  Fly   207 HLENPVVTRYDTSKYPFLVYKMMGTTVEIAIFPTGYVIVLFATTMEITKLAIAHILPTLYRLK 269
            .|.:...:.|:...:|.|:|:|:...:.:.||.:|.|::..|...:....|..:|.|.|...|
Mosquito   382 VLTHGRFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFENIYPILKSFK 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf5NP_608700.2 PLN00062 110..265 CDD:177693 31/155 (20%)
TBP 189..268 CDD:425630 18/78 (23%)
TbpXP_309748.3 None

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