DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr23a and Gr59e

DIOPT Version :9

Sequence 1:NP_787965.1 Gene:Gr23a / 33453 FlyBaseID:FBgn0041248 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_788431.1 Gene:Gr59e / 37725 FlyBaseID:FBgn0041233 Length:399 Species:Drosophila melanogaster


Alignment Length:390 Identity:77/390 - (19%)
Similarity:144/390 - (36%) Gaps:93/390 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 WLQFLGWLTWFISMWTQSVIYA-------QTIDCTL-------DCSLRHILTFFQTVSH-----A 83
            ||..|..|...:.:||.|::..       .||:..|       :.:...||.::..::.     |
  Fly    30 WLHTLWSLFLLMYIWTGSIVKCLEFTVEIPTIEKLLYLMEFPGNMATIAILVYYAVLNRPLAHGA 94

  Fly    84 FIVVTSFLDGFRIKQDQLDEPIAFEDSDPWLAFTV----LAMLVPTLGVEY----LVCSNAPEYA 140
            .:.:...:.|.:.|..:|......:.:...:|.|:    |.:||..:..::    ...||:    
  Fly    95 ELQIERIITGLKGKAKRLVYKRHGQRTLHLMATTLVFHGLCVLVDVVNYDFEFWTTWSSNS---- 155

  Fly   141 FRIRIYHLKTLPSFLAL--QVQIISFILEVMKVNIRVRQTKLQLLILARELSCRWPQRKQKPQFS 203
                :|:|..|...|.:  ..|.:.|:..||.   ::|....:|.:|.|.     ||...|....
  Fly   156 ----VYNLPGLMMSLGVLQYAQPVHFLWLVMD---QMRMCLKELKLLQRP-----PQGSTKLDAC 208

  Fly   204 DQQAHRV------------KDLKRRYN---DLHYLF-VRINGYFGGSLLTIIIVHFAIFVSNSYW 252
            .:.|..|            ::::...|   .:|..| :|...|...:||..::   :|.| ..|.
  Fly   209 YESAFAVLVDAGGGSALMIEEMRYTCNLIEQVHSQFLLRFGLYLVLNLLNSLV---SICV-ELYL 269

  Fly   253 LFVDIRTRPWR-----IYAILL------NLGFIFNVALQMAAACWHCQQSYNLGRQIGCLISKLV 306
            :|....|..|.     :|.:|.      .:.||.:|..|:      .:|..||     |.:...:
  Fly   270 IFNFFETPLWEESVLLVYRLLWLAMHGGRIWFILSVNEQI------LEQKCNL-----CQLLNEL 323

  Fly   307 KPQGSKLYNDLVSEFSLQTLHQRFV---VTAKDFFSLNLHLLSSMFAAVVTYLVILIQFMFAERS 368
            :...|:|.. .::.|.||.  ||.:   :.|....:|:...|......::..::.|||.....:|
  Fly   324 EVCSSRLQR-TINRFLLQL--QRSIDQPLEACGIVTLDTRSLGGFIGVLMAIVIFLIQIGLGNKS 385

  Fly   369  368
              Fly   386  385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr23aNP_787965.1 7tm_7 <141..362 CDD:285581 52/252 (21%)
Gr59eNP_788431.1 7tm_7 9..381 CDD:285581 76/384 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.