DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr23a and egl-47

DIOPT Version :9

Sequence 1:NP_787965.1 Gene:Gr23a / 33453 FlyBaseID:FBgn0041248 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001023728.1 Gene:egl-47 / 183687 WormBaseID:WBGene00001211 Length:522 Species:Caenorhabditis elegans


Alignment Length:415 Identity:74/415 - (17%)
Similarity:160/415 - (38%) Gaps:85/415 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VQASSRVVLKIFHFILV---AFSLRSRR------LSRLVLWLQFLGWL----TWFISM-WTQSVI 57
            |..|.|.:|.:|..:.:   ....:|||      :.:|:|::.::...    ::.|.| :...::
 Worm   106 VSNSLRSILFLFRLLAIFPATTDRKSRRKRNHRSIIKLILYVNYIVLAVLLNSFLIKMNFKVLML 170

  Fly    58 YAQTIDCTLDCSLRHILTFFQTVSHAFIVVTSFLDGFRIKQ------DQLDEPI--AFEDSDPW- 113
            |..........::..::|..:.|.:.|::|.|.:. |:..|      |.:|...  ||..|.|. 
 Worm   171 YKHKFGLMHTGTVASMITATKPVINVFVIVLSAIK-FKSHQRLLKTIDMVDVCFRSAFGVSPPLR 234

  Fly   114 -----LAFTVLAMLVPTLGVEYLVCSNAPEYAFRIRIY--HLKTLPSFLALQVQIISFILEVMKV 171
                 ..||:|.:....|.::.:      |:.....|:  |:.|..||:.:.|..:..|:.::..
 Worm   235 IYKFVFFFTLLIIFFSALILKVV------EFVGTGEIFGEHILTDCSFILVPVLSLWNIIPLLYY 293

  Fly   172 NIRVRQTKLQLLILARELSCRWPQRKQKPQFSDQQAHRVKDLKRRYNDLHYLFVRINGYFGGSLL 236
            ::.....:.....|.:.::....:|....:|..:|..|:.:::....|:....:..:  ...|||
 Worm   294 HLYNILVRFYCRTLIKSMNREHKKRHFSLKFYYEQFTRITNVQEAVGDVFNPLLLFS--LAWSLL 356

  Fly   237 TIIIVHFAIFVSN-SYWLFVDIR----TRP---------------WRIYAILLNLGFIFNVALQM 281
            .:.:..:  |:|. :..|.|.|.    |.|               |..|.:::.:       |.:
 Worm   357 VLCLTLY--FLSEPTSTLLVPITPEQVTNPKIREKLNITVHVKICWAAYQVVMAI-------LHI 412

  Fly   282 AAACWHCQQSYNLGRQIGCLISKLVKPQGSKL--------YNDLVSEFSL-QTLHQRFVVTAKDF 337
            ...|.....:....|||...:.::|....:.|        .:.:.::|.. .|:.:.|.:....|
 Worm   413 IIICSTGMMTNETTRQIVNAVLRIVPDANADLDRFQISCFVHKMTTQFMWGMTVWRAFPLERTTF 477

  Fly   338 FSLNLHLLSSMFAAVVTYLVILIQF 362
            |:|        .:.:|||.::|.:|
 Worm   478 FTL--------ISVIVTYSLLLFRF 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr23aNP_787965.1 7tm_7 <141..362 CDD:285581 42/251 (17%)
egl-47NP_001023728.1 7tm_7 110..495 CDD:303125 72/411 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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