DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr23a and Gr92a

DIOPT Version :9

Sequence 1:NP_787965.1 Gene:Gr23a / 33453 FlyBaseID:FBgn0041248 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_732489.2 Gene:Gr92a / 117473 FlyBaseID:FBgn0045471 Length:386 Species:Drosophila melanogaster


Alignment Length:422 Identity:86/422 - (20%)
Similarity:149/422 - (35%) Gaps:132/422 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RVVLKIFHFI-LVAFSLRSRRLSRLVLWLQFLGWLT------------WF----ISMWTQSVIYA 59
            |.:.:...|| ::.|.|.:|:..:.|....:|.||.            |.    ||:.|..|:..
  Fly    19 RYIFRYAQFIGVIFFCLHTRKDDKTVFIRNWLKWLNVTHRIITFTRFFWVYIASISIKTNRVLQV 83

  Fly    60 -------------------------QTIDCTLDCSLRHILTFFQTVSHAFIVVTSFLDGFRIKQD 99
                                     :.||.     :...|..|:.||..|...|....|.|....
  Fly    84 LHGMRLVLSIPNVAVILCYHIFRGPEIIDL-----INQFLRLFRQVSDLFKTKTPGFGGRRELIL 143

  Fly   100 QLDEPIAFEDSDPWLAFTV-----LAMLVPTLGVEYLVCSNAPEYAFRIRIYHLKTLPSFLALQV 159
            .|...|:|.....:|.||:     ...|:......|||.      |..|.| |:.:: .:|:|.|
  Fly   144 ILLNLISFAHEQTYLWFTIRKGFSWRFLIDWWCDFYLVS------ATNIFI-HINSI-GYLSLGV 200

  Fly   160 QIISFILEVMKVNIRVRQTKLQLLILARELSCRWPQRKQKPQFSDQQAHRVKDLKRR----YNDL 220
             :.|.:.:.:..|:|::..||                  ....|.|:..||::...:    |.::
  Fly   201 -LYSELNKYVYTNLRIQLQKL------------------NTSGSKQKIRRVQNRLEKCISLYREI 246

  Fly   221 HYLFVRINGYFGGSL--------LTIIIVHFAI---FVSNS--YWLFVDIRTRPWRIYAILLNLG 272
            ::..:..:..|...|        |.|.::.|.:   |..||  :|:.:...         :|:| 
  Fly   247 YHTSIMFHKLFVPLLFLALIYKVLLIALIGFNVAVEFYLNSFIFWILLGKH---------VLDL- 301

  Fly   273 FIFNVALQMAAACWHCQQSYNLGRQIGCLISKLVKPQGSKLYNDLVSEF--SLQT--LHQR---F 330
            |:..|:::.|.     .|..|:|.|.|.:             .|| |:|  :|.|  ||.|   |
  Fly   302 FLVTVSVEGAV-----NQFLNIGMQFGNV-------------GDL-SKFQTTLDTLFLHLRLGHF 347

  Fly   331 VVTAKDFFSLNLHLLSSMFAAVVTYLVILIQF 362
            .|:....|.:.........:|:::.|..:.|:
  Fly   348 RVSILGLFDVTQMQYLQFLSALLSGLAFIAQY 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr23aNP_787965.1 7tm_7 <141..362 CDD:285581 49/244 (20%)
Gr92aNP_732489.2 7tm_7 18..382 CDD:285581 86/422 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.