DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr23a and Gr28a

DIOPT Version :9

Sequence 1:NP_787965.1 Gene:Gr23a / 33453 FlyBaseID:FBgn0041248 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster


Alignment Length:385 Identity:80/385 - (20%)
Similarity:138/385 - (35%) Gaps:105/385 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FILVAFSLRSRRLSRLVLWLQFLGWLTWFISMWTQSVIYAQTIDCTLDCSLRHILTFFQTVSHAF 84
            |:.:...|..||: .|..:|..||.|.:       :|||.        | :.:.|....|:|.:|
  Fly   127 FVRLGMKLDYRRI-LLSSFLISLGMLLF-------NVIYL--------C-VSYSLLVSATISPSF 174

  Fly    85 IVVTSFLDGFRIKQDQLDEPIAFEDSDPWLAFTVLAMLVPTLGVEYLV----CSNAPEYAFRIRI 145
            :..|:|                               .:|.:.:..:|    |:.  :.| |.|.
  Fly   175 VTFTTF-------------------------------ALPHINISLMVFKFLCTT--DLA-RSRF 205

  Fly   146 YHL-KTLPSFLALQVQIISFI-LEVMK--VNIRVRQTKLQLLILARELSCRWPQRKQ-------- 198
            ..| :.|...|...::.:|.: |..|.  ||.|....:|:.||..       |.::.        
  Fly   206 SMLNEILQDILDAHIEQLSALELSPMHSVVNHRRYSHRLRNLIST-------PMKRYSVTSVIRL 263

  Fly   199 KPQFSDQQAHRVKDLKRRYNDLHYLFVRINGYFGGSLLTIIIVHFAIFVSNSYWLFVDIRTRPWR 263
            .|:::      :|.:...:|.|..:...|..||...||.||.:.|...:.:.:::...| ..|.|
  Fly   264 NPEYA------IKQVSNIHNLLCDICQTIEEYFTYPLLGIIAISFLFILFDDFYILEAI-LNPKR 321

  Fly   264 IYAILLNLGFIFNVALQMAAACWH---------------CQQSYNLGRQIGCLISKLVKPQGSKL 313
            :.....:..|.| ..:|:   .|:               ...||.     ..::.|::.......
  Fly   322 LDVFEADEFFAF-FLMQL---IWYIVIIVLIVEGSSRTILHSSYT-----AAIVHKILNITDDPE 377

  Fly   314 YNDLVSEFSLQTLHQRFVVTAKDFFSLNLHLLSSMFAAVVTYLVILIQFMFAERSSTRGS 373
            ..|.:...|||..|::.:.||...|.|:..|:.::..|...||:|||||.|........|
  Fly   378 LRDRLFRLSLQLSHRKVLFTAAGLFRLDRTLIFTITGAATCYLIILIQFRFTHHMDDTSS 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr23aNP_787965.1 7tm_7 <141..362 CDD:285581 53/247 (21%)
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 79/376 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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