Protein Alignment Trf4 and Trf5

DIOPT Version :9

• Sequence 1: NP_608699.1
• Gene: Trf4 / 33452
• FlyBaseID: FBgn0031444
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_608700.2
• Gene: Trf5 / 33454
• FlyBaseID: FBgn0031446
• Length: 305
• Species: Drosophila melanogaster
• Alignment Length: 303
• Identity: 92/303 - (30%)
• Similarity: 150/303 - (49%)
• Gaps: 24/303 - (7%)

  Fly    27 VKLKEGTSAKLSSLDKLFEELKIS---KESSAKEDLVTEPMKTESYLYKDYFNKSPIDFPWEKAY 88
            :|.|...:|.:|. ..|.|:.|:|   ::.|.::.|..:..:....:      ..||..|.|...
  Fly    18 IKTKVMKTASMSR-KTLLEDAKLSTSDQDPSDRQVLANKASEGAEEM------SLPIVNPREPTL 75

  Fly    89 EKGSSLGPDFYIDYENIFDNVANLAEIEEKLELHFRPFTCVMDFNCRFSMYELCLLLAESRFDPS 153
            :           |..:|::||:.|.:|:..|.:.::||.|:.....:|.:.||.:.|..:.|:|.
  Fly    76 K-----------DVLSIYENVSKLGDIQRYLNVIYKPFYCLAMTTSKFHLLELDMGLKNTAFEPE 129

  Fly   154 SHPSVVVKITHPSAQVKIHAGGKISSTALNADSARSGLFKVIRILQDLDYKVDIMNFSKNIVNAS 218
            .|.::.|....|:..::|:..|.|...|...:|||.||..:::.|:.|.|...:.....|.|||:
  Fly   130 KHMALFVYRYSPTRSIRIYPHGNIYCQAFCKNSARYGLANILKELRYLGYAPRLRRLKTNAVNAT 194

  Fly   219 FSMPFKIDLDLMSRRHVVEVAQNRSRRPFITYTTENLGVRFAVFPTGFVLVLHSTSHCETREAIA 283
            ||:||.::|......:.|....:.|:.||:.|......|..|:||||:|:||.:|:...|:.|||
  Fly   195 FSVPFNLNLRQFHLENPVVTRYDTSKYPFLVYKMMGTTVEIAIFPTGYVIVLFATTMEITKLAIA 259

  Fly   284 NFLPILAKLKNGYPTAEEKLGQLVGDISYKLFWEK--QLEDDK 324
            :.||.|.:||:.| ..:.||....|||.|||.||.  |...||
  Fly   260 HILPTLYRLKDPY-QEQCKLSHSSGDIDYKLLWENHFQKNGDK 301

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trf4	NP_608699.1	TBP	128..200	CDD:278767	20/71 (28%)
		PLN00062	131..294	CDD:177693	53/162 (33%)
		TBP	213..291	CDD:278767	31/77 (40%)
Trf5	NP_608700.2	PLN00062	110..265	CDD:177693	51/154 (33%)
		TBP	191..267	CDD:278767	30/75 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2101
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0019506
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10126
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.910