Protein Alignment Trf4 and Trf2

DIOPT Version :10

• Sequence 1: NP_608699.1
• Gene: Trf4 / 33452
• FlyBaseID: FBgn0031444
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_001096905.1
• Gene: Trf2 / 31773
• FlyBaseID: FBgn0261793
• Length: 1715
• Species: Drosophila melanogaster
• Alignment Length: 294
• Identity: 66/294 - (22%)
• Similarity: 113/294 - (38%)
• Gaps: 51/294 - (17%)

  Fly    19 ENDARFDGVKLKEGTSAKLSSLDKLFEELK-----ISKESSAKEDLVTEPMKTESYLYKDYFNKS 78
            ||.|....| ...|.....:.:|.|.||:.     |..:...|:::..:..::.:       |..
  Fly  1212 ENKANLPTV-ASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEVAEDEEESSN-------NAK 1268

  Fly    79 PIDFPWEKAYEKGSSLGPDFYIDYENIFDNVANLAEIEEKLELHFRPFTCVMDFNCRFSMYELCL 143
            |||.                   ::.|.||       |.:|::......|.....|...:.|:.|
  Fly  1269 PIDL-------------------HQPIADN-------EHELDIVINNVVCSFSVGCHLKLREIAL 1307

  Fly   144 LLAESRFDPSSHPSVVVKITHPSAQVKIHAGGKISSTALNADS-ARSGLFKVIRILQDLDYKVDI 207
            ..:...: ...:..|.:|:.||.....|.:.|:|:.|...::| |:....:..|.|..|.:....
  Fly  1308 QGSNVEY-RRENGMVTMKLRHPYTTASIWSSGRITCTGATSESMAKVAARRYARCLGKLGFPTRF 1371

  Fly   208 MNFSKNIVN--ASFSMPFKIDLDLMSRRHVVEVAQNRSRRPFITYTTENLGVR--FAVFPTGFVL 268
            :||  .|||  .:.|||:.|.:...|.||....:......|.:||...:...:  ..:|.||.|.
  Fly  1372 LNF--RIVNVLGTCSMPWAIKIVNFSERHRENASYEPELHPGVTYKMRDPDPKATLKIFSTGSVT 1434

  Fly   269 V-LHSTSHCETREAIANFLPILAKLKNGYPTAEE 301
            | ..|.:|.|:  ||.:..|::...:. ..:|||
  Fly  1435 VTAASVNHVES--AIQHIYPLVFDFRK-QRSAEE 1465

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trf4	NP_608699.1	TBP_TLF	131..>234	CDD:447593	26/105 (25%)
		TBP	213..292	CDD:425630	24/83 (29%)
Trf2	NP_001096905.1	PHA03418	<644..732	CDD:177646
		DUF5401	<891..>1088	CDD:375164
		TLF	1283..1456	CDD:239953	44/177 (25%)